| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5027 |
|---|
| Symbol | |
|---|
| ID | 5736986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | + |
|---|
| Start bp | 36140 |
|---|
| End bp | 37066 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641282194 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_001547785 |
|---|
| Protein GI | 159901539 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCC CTCATTCATT GTTTCACGTA CGTCGTTTGA TTGTTCTCTT GGTTCTGCTG
ATGATGATTA TTGGACAAAA ACCTTCGCAT GCGCAGGACA ATGCTCCTGC CCCACATGAT
CCGCATACGC CGGTTACCAA TACTGGATCG CTGCCGCCTA AATTCGCCCT AGCCCCGGAT
GCCGTCATTT CCCCCTCAAC AGGCAGCGAA CTCCCAAGCA CCGACGAGCC ACAAGAGGAG
GTCAGCATCA ACAGCATCAT CGGTCCCGAT TCGCGCAAAC GAATCCTCAA TACGCTCCCT
TATCCATATG GGACGATCGT ACACCTCTAC GTATCATACC CTCTTGCTGA GGGAGAATGC
AGCGGGGTTC TGATCAGCCC CGACACCGTC CTGACCGCCG GCCATTGCGT CTTTACAAAG
GAGCATGGTG GCTGGGCGGA TTTCATAATA GCTTCGCCGG GACGAAATGG TAGTAATACC
TTTCCCCATC CTCCTTGTCC CGATAAACAG CTGTTTAGCA CGACTGGCTG GATACACGAC
CTTAATCCGA GTTACGACTA TGGTGTGATT AAGTTGACTT GCTCATATAC TGCTACAGGA
TGGATGGGCG TGAGGGCGGC TCCTGATGCG GGACTTAGGG GACAAACCAC AATCCTGACT
GGATATCCGA GCGATAAACC GTTGGGTACG ATGTGGAACT CACAGGATAG TGTGCGGAAC
TACAGTTCCA GTCAGGTATT TTATCAGAAC GATGCCACCC AAGGACAAAG TGGTTCGCCA
GTATGGAATA GGAACGACAT CACCTGTAAT CCGTGTGTTT TCGCCATACA TACGGATGGA
GTGAGTCCAG GTACTGGGGG CAACAATGGA GGCGTGAGGA TAGATGCCGA AATTATGGAG
AACCTTTGGA GTTGGATTGC TCCATAA
|
|---|
| Protein sequence | MSIPHSLFHV RRLIVLLVLL MMIIGQKPSH AQDNAPAPHD PHTPVTNTGS LPPKFALAPD
AVISPSTGSE LPSTDEPQEE VSINSIIGPD SRKRILNTLP YPYGTIVHLY VSYPLAEGEC
SGVLISPDTV LTAGHCVFTK EHGGWADFII ASPGRNGSNT FPHPPCPDKQ LFSTTGWIHD
LNPSYDYGVI KLTCSYTATG WMGVRAAPDA GLRGQTTILT GYPSDKPLGT MWNSQDSVRN
YSSSQVFYQN DATQGQSGSP VWNRNDITCN PCVFAIHTDG VSPGTGGNNG GVRIDAEIME
NLWSWIAP
|
|---|
| |