Gene Haur_5001 details

Gene Information

• Locus tag: Haur_5001
• ID: 5736960
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009973
• Strand: +
• Start bp: 3469
• End bp: 3999
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641282168
• Product: zinc finger SWIM domain-containing protein
• Protein accession: YP_001547759
• Protein GI: 159901513

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACCG TCATCCAAAC CGCCATGCTC ACCCACTTCG GCCAACTCAC CGCTGCCATC 
ACCATGGCCG CACCCACGCC TGCGCTGCAC CATTCGGCGG CACTGTTGCT GGCCCGCTGT 
GACGAGATTG TGCCCAATCA TTGCGCACCG ACCTCGATCA CGGCCACGGC CCTCAAACCG 
ATTCCGCCCA GCAGCCCCTT GGCCACCTTG CTCCAGAGCG ACACGACAGC GGATGACCGC 
TGGTGCTTTC GGGTGCAACA AGCGCTCTTG ATTGCCGGAG ATTGTTCGCG TCGCCAACTC 
TATGAGGCGG TGGTGCTTGT CCTCGGCCAG CAGGTCTCAC GCAGCGATGC GACCACGTTC 
ACGGTGCAGG GGTCAAAAGC CTACACCGTC ACACTGGCGA ATGGCATCGA CCATACCGAG 
GGCTTTACCT GTCAATGCAA AGGCTTTTGG AGCCATGGGG GTGGGCAACT CTGCAAGCAT 
GTCTTGGCTG CCGCGCTGAT TGCGCTTGAT CCGGAGGAAG GCGGATGCTG A 

 

Protein sequence

MQTVIQTAML THFGQLTAAI TMAAPTPALH HSAALLLARC DEIVPNHCAP TSITATALKP 
IPPSSPLATL LQSDTTADDR WCFRVQQALL IAGDCSRRQL YEAVVLVLGQ QVSRSDATTF 
TVQGSKAYTV TLANGIDHTE GFTCQCKGFW SHGGGQLCKH VLAAALIALD PEEGGC