Gene Haur_4998 details

Gene Information

• Locus tag: Haur_4998
• ID: 5736834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 6340261
• End bp: 6345663
• Gene Length: 5403 bp
• Protein Length: 1800 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641282165
• Product: Na-Ca exchanger/integrin-beta4
• Protein accession: YP_001547756
• Protein GI: 159901509

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.329522
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCAAT CCCCTGATCA AGGGCGAGCC TTGCGCATGC AGGTTCGTCG TCGTGCATTG 
GTGCTTAATT TGGCACTATT GTTGGCATTA TTTGTTGTTC CGCTTCAACC AACAGCCGCA 
CGCATTGCAG CACCACAGCT TCCTGAAGCC AGTTCTGCGA GTGCTCCAAG CGCTGCTTGT 
ACGGTTACCA ACACCAACGA TGCTGTTTCG CCGCCAGTTG ACTCGTTGCG GGCAGCCTTG 
GCGAATGCAG CATGTTCGCC AATCCTATTC GACCCAAGTT TGGCGGGCCA AACAATCACG 
TTAACTGCTG GCGAATTGAC CGTTGGACGC TTGGTGGTGA TCGATGGAGC CGCCGCGCCT 
GGCCTGAAAA TCGATGGCAA CAACGCCTCA CGGATTTTCA ATGTTAATGT CACGTCAGCC 
AATCTCTTAA TTTACAACTT GACGTTGCAA CGTGGTAAAG CGCCCAACTC GGGCATTACC 
AACGGCGGTG CGGTGCTTAA CCAAGGTGGC ACGGTTGTTA TCAGCAACAC TGCTGTACTT 
TCGAGCACTG CTGGCACCAG TGGTAACGGC GGGGGCTTGC GCAACCAACG TACCAGCGGG 
ATCGCCGGTG TGCTCAGGGT CTACAATAGT GTGATTCGCG GCAATACTGC GCCAAATAAT 
GGCGGTGGAT TTAGCACCAG CGGCAGTATC ACCACTATCG TCAATAGCGC TGTGTTGAGC 
AATACCGTCA CCAGCACTTC GGGTGGGGTG ACAGGTAGTG GTGCATTGGG ATTGGGCGCA 
GGCATTCACC ACGTTAATAT TCAAAATCCT GCGGCTAACC TAACCACGGC GATCACCAAT 
ACCACGATTG CTTATAACCG TGGCAAGGCT GGGGCAGCAA TCTACAACGA TAATAATGGT 
ATGATCGATG TTTACTACAG CACGATCGCC TACAACGCTG CCTCGAATAG CAGTGGTTCG 
GCGGTTGGTG GAGTAATCAA TGGGGTTACT ACCGCCGGCC AGCCGGCTTT ACGCCTCAGT 
TTGTATAACA CGATTGTTGC CAATAATACT CAACGCGCTG CCAATACCAC CCTTACCAGC 
GCTGATCTTG GGGTTGGCAC TGGTCAAACA ATTACTTCAA ATGGCTACAA TTTGATCGAA 
ACAGTGCCAA GTGGCGCGGT CTTTGGCGGC ACAACTGCCA CCAACATCAC TGGCCAAGAT 
CCAGTGTTAG GCGATGTGCT GAATAATGGT GGTGGTACGC CAACAGCAGC ATTGCTGCAA 
AATAGCCCTG CCTACAACAC TGGCGATCCT GCGCCTATTG CAGCCCCAAC GACCGATCAG 
CGTGGGCCTG GCTTTGTGCG AGTGCGCGAA GGCCGTTTGG ATATTGGCGC ATTTGAAGCA 
ACCAACAGCA TCCAAACATC GCCAATTTTG GTTAGCACCA ATTTGGATAC TAATGATGGA 
GCTTGTACAA CGTTCGATTG TTCGCTGCGT GAAGCGATCA CTTTAGCCAA TTCAACCCCG 
CAAACCGATA CAATTCGCTT TAATTTGCTT GGCAGCGGTG TGCGCACCAT CTCGCCAACG 
ACGGCCTTGC CAGCGATTAG TGCTCCGGTG ATTCTCGATG GTTTGAGCCA AGCGGGCGCT 
GCCTGTAATG CCCCATTGAT CGAATTAAAT GGTTCGTTGG CAGGAGCAAG TGCCAATGGC 
TTGGACGTAA CAGGCGGCAG TAGCCTGATT CGTGGGTTGG TGATCAATCG TTTTGCTGGC 
AACGGCGTGC GTTTGGCAAC CCTCGGCGGC AATACGCTCG AATGTAATTT CATCGGCAGC 
GATGCTTCAG GTACGGTCGA TGCTGGCAAT AGCTTATCGG GAGTGCGAGT CGAATCTGCC 
AACAACTTAA TTGGCGGCAG CGGCGGTTCG AATGTGCGCA ACTTGATTTC GGGCAACGAT 
GGCGATGGCA TCACGCTGGT GGCTGGCGCG AATGCAAACA CCATCCAAAA TAACTATATT 
GGTACGATGC TGAGTAGCAA CGCAGCGCTT GGCAATAGCA AAAGCGGCGT GCGCATCGCC 
AGCGATAATA ATCAAATTGG TGGCACATTT GGCACATTGG GCAACGTCAT TTCGGGTAAC 
TTCGAACATG GTGTGTTGGT CAATGTGACA GCTGCACCGT TGGGTAACCG CATTCAAGGT 
AACTTTATTG GTACGAACAT TGGGGCAACC CTCGATGTGG GCAATACCCA GCGCGGGGTC 
TTTATCGACC GCACCGCCAA TACCTTGGTT GGTGGCACGA CGGCTGAGCG CAACGTCATT 
TCGGGCAACA ACAGCGATGG CGTGGCAATT ATCGAAGCTG GCGCTACCAA CAACAAAATT 
TCGGGCAACT ACATCGGTAC CAACAACGGT GGTGGCTCAG CCTTGGGCAA TAGCTCGGCT 
GGGGTCTATA TTTTCAATGT TGGTGGTAAC ACGATCGGCG GTACGACCAC TGCCGAACGC 
AACTTGATTT CAGCCAATAG CAACGGGATT GTGATTGGCG GCGGCTCGGC GATTGGTAAT 
ATCATCAAGG GCAATTACAT TGGCACAACC CTGAATGGCA ACGGAGCCTT AGGCAATGTC 
AGCGATGGCA TCAAGCTCGA CGGTGCACGT AACACGCAAA TTGGTGGTAC AACCATCGGC 
GAGCGCAACG TGATTTCAGG CAATGGCAAT AATGGGATTA ATATTTTCAC CTCAAGCTCG 
TCGGGCAATG TGATTCAAGG CAATTACATC GGCACGAACG CCTTTATTCC GCCAGCTAGC 
CCAACTGGGG TCGCCAACCA ATTCAATGGC GTGCGGGTCG CGGCTGGCAC GAACACAACC 
ATCGGCGGCT CGGCTCAAGG TGCTGGCAAC GTGATTGCCT TCAATGCCAA AAATGGGGTG 
CTGATTACCC AAGGCGCAGC GGTTGCCACG ACCCAACGGA TTCAGCGCAA TAGCATTTTC 
AGCAACAATC GCTTGGGCAT CGATCTTGGC CCCGACAATA ATGCTAACGG CGATGGCGTA 
ACTGCCAATG ATGCCAACGA TAGCGATACT GGGCCAAACA ATCTGCTCAA CTATCCAATT 
GTTGAATCGA CCAGCTCGGG TGGGGGCTTA ACCCAAATTA TTGGCTCGTA TATTGGCGCA 
ACCAATACGG CCTTGACCCT CGATTTCTAT AGCCAAGGCG CGTGCGATCC AAGCAACTTT 
GGCGAAGGTC AAAGCTACAT TGGCTCGTTT GCAATCAACA CAGGCCCAAC CGGAGCAATT 
TCTTACACCG CCAATTTGAC CACGACTGTG GCACTGGGCC AACGGGTAAC CGCAACCGCC 
GTCGATGGCA GCGGTAACAC CTCGGAATTC TCACGCTGTT CATCGGTAGG CAACTTGCCC 
AGCGTGAGCG TCAACGATGT AACATTAACC GAAGGCAACA GCGGCATTAC CCAATTCAAC 
TTTACCCTGA GCTTATCGGC AGTTAGTCCT AATCCAGTTG TCGTCGATTA TGTAACGGCT 
GACGATACAG CGATTGCGCC CAATGATTAC ACTGCAGCAA GCACAACCGC CACCATTCCA 
GCCAATACCT TGAGTATTCC GGTGACGATT GACGTTCACG GCGATACGCA ATTTGAACTC 
AACGAACGCT TCTTTATCAA TTTGTTGAGT GCCACCAACG CGGCAATCGG CGATGGCCAA 
GGCATTGGCA CAATTACCAA CGACGACACT GCTCCAAGCA TCAGCGTGAA TGAAGCAAGT 
GCGAATGAAG GCAGCGGCGC ACCAGGCCAA GTCAATGTGC CAGTCACGCT CTCGAATGCC 
AGCTATTTGC CAATTAGTGT TGAATTTATC ACAACTGATG GCACTGCCAA CGAATCCAGC 
GATTACACTA CGATCACTGG CACACTCAAT TTTGCTCCAG GCGAAACCAG CAAAACAATT 
GCAATTGCCG TGGTTGGCGA TTTGATCGAC GAGCCAGACG AAACGATCAA CGTGGCCTTG 
AGCAATGCCG TCAACACCAC AATTAGCAAT GATGAAGCAG TTGCCACGAT TCTCGACGAC 
GATGCAACGC CTGTGCTCAA TGTGGCCAAT GGCGAAGTAA CCGAAGGCAA TAGCGGCAGC 
GTAACCGTCA CGCTCAATAT CAGTTTGAGT AACCCTAGCA GTAGCGCAAT CACGGTTGAT 
TATCTGACTG TGGGAGGCTC GGCGAGTGCT GGCAGCGATT TTGCGATCAG CAGTGGTCCA 
TTAAGCTTTG CCGCTGGTGA AACTAGTAAA ACCGTCGATG TGTTTATCCA AGGCGATATG 
GTTGATGAAA GCGATGAGTC GTTCACGCTT GAATTGAGCA ACCCAGTCAA TGCAACGGTT 
GGGAGTGCTG GTACGGTGGT TATTCTCGAC GATGATGCTG CTCCAATAAT CAACTTTGTT 
GCGCCGCCTA TGCAAGAAGG CAATAGTGGC ACGCGACCAT TGACGGTTAG CTTGATGCTC 
TCGGCAATCA GCGGCCAAGC AATTAGTGTC CAGTATGCGA CCCACGACAA TACAGCGCTT 
GGCGGCAGCG ATTACACCAC GATCAGCGGC ACCTTGACGA TTCCGGCAGG CCAGCTAACC 
CAAAGATTTA TTGTCAATGT CAATGGTGAT CTGATCGATG AAAGCAACGA AACCTTCACC 
GTGACGCTGA GCAATCCGCA AAATGCTAGC TTGTTGGCTC CTGATGCAGT TGCAACAATC 
ATCGACGACG ATGGTGCGCC AACGATCAAT GCTGATGCCA TTAACGTTAC CGAAGGCGAT 
GCCAACAGCG TTAACGCCGT ATTCAACGTC AGCCTATCCA ACCCTAGCGC TACCGCTGTA 
ACCGTGAACT ATTCAACTTT AGCTGGAACG GCAGCCAGTG GCACAGACTT TACACCCGCC 
GCTGGTACAT TAAGTTTTGC GCCTGGTGAA CTTAGCAAAA CCGTGACCGT GGTTGTGCTT 
GGCGATCTCG TGGATGAGGC TGATGAGACC TTTACCCTCG TTCTGAGTAG CGCGACAGGT 
GGCGCAACGC TTGGCTCAAA CGGCACAGCC ACCATTGTTG ATAACGACCC AACCCCAAGC 
GCTAGCTTGA GTGGTCTCAA CAGCGTGGTT GAAGGCTCTG GCATCACCAC AACCTTACAA 
TTTACCGTGA CGCTTTCGGC GGCGAGTGGG CGGGCTAGCA GCCTACAATT TGCCACGACA 
GCGGGCACGG CCAGCGCTGG TAGTGATTTT GTCGGCCAAA ATTTGATGCT CAATTTTGCT 
GCTGGCGAAA CCCAAAAGGT CGTCAGTGTG GCAATTGTCG GCGATCGGGT GAAGGAGCCA 
AACGAAAGCT TTAGCGTTGC CATCAGCAAT CCCAGCAATC TCACGCTTGG CACAGCTACC 
ATCAGCGTCA CAATTGTTGA TGATGATGAA TGGCTGGTGT ATATGCCGTA TGTAGTGAAA 
TAG 

 

Protein sequence

MLQSPDQGRA LRMQVRRRAL VLNLALLLAL FVVPLQPTAA RIAAPQLPEA SSASAPSAAC 
TVTNTNDAVS PPVDSLRAAL ANAACSPILF DPSLAGQTIT LTAGELTVGR LVVIDGAAAP 
GLKIDGNNAS RIFNVNVTSA NLLIYNLTLQ RGKAPNSGIT NGGAVLNQGG TVVISNTAVL 
SSTAGTSGNG GGLRNQRTSG IAGVLRVYNS VIRGNTAPNN GGGFSTSGSI TTIVNSAVLS 
NTVTSTSGGV TGSGALGLGA GIHHVNIQNP AANLTTAITN TTIAYNRGKA GAAIYNDNNG 
MIDVYYSTIA YNAASNSSGS AVGGVINGVT TAGQPALRLS LYNTIVANNT QRAANTTLTS 
ADLGVGTGQT ITSNGYNLIE TVPSGAVFGG TTATNITGQD PVLGDVLNNG GGTPTAALLQ 
NSPAYNTGDP APIAAPTTDQ RGPGFVRVRE GRLDIGAFEA TNSIQTSPIL VSTNLDTNDG 
ACTTFDCSLR EAITLANSTP QTDTIRFNLL GSGVRTISPT TALPAISAPV ILDGLSQAGA 
ACNAPLIELN GSLAGASANG LDVTGGSSLI RGLVINRFAG NGVRLATLGG NTLECNFIGS 
DASGTVDAGN SLSGVRVESA NNLIGGSGGS NVRNLISGND GDGITLVAGA NANTIQNNYI 
GTMLSSNAAL GNSKSGVRIA SDNNQIGGTF GTLGNVISGN FEHGVLVNVT AAPLGNRIQG 
NFIGTNIGAT LDVGNTQRGV FIDRTANTLV GGTTAERNVI SGNNSDGVAI IEAGATNNKI 
SGNYIGTNNG GGSALGNSSA GVYIFNVGGN TIGGTTTAER NLISANSNGI VIGGGSAIGN 
IIKGNYIGTT LNGNGALGNV SDGIKLDGAR NTQIGGTTIG ERNVISGNGN NGINIFTSSS 
SGNVIQGNYI GTNAFIPPAS PTGVANQFNG VRVAAGTNTT IGGSAQGAGN VIAFNAKNGV 
LITQGAAVAT TQRIQRNSIF SNNRLGIDLG PDNNANGDGV TANDANDSDT GPNNLLNYPI 
VESTSSGGGL TQIIGSYIGA TNTALTLDFY SQGACDPSNF GEGQSYIGSF AINTGPTGAI 
SYTANLTTTV ALGQRVTATA VDGSGNTSEF SRCSSVGNLP SVSVNDVTLT EGNSGITQFN 
FTLSLSAVSP NPVVVDYVTA DDTAIAPNDY TAASTTATIP ANTLSIPVTI DVHGDTQFEL 
NERFFINLLS ATNAAIGDGQ GIGTITNDDT APSISVNEAS ANEGSGAPGQ VNVPVTLSNA 
SYLPISVEFI TTDGTANESS DYTTITGTLN FAPGETSKTI AIAVVGDLID EPDETINVAL 
SNAVNTTISN DEAVATILDD DATPVLNVAN GEVTEGNSGS VTVTLNISLS NPSSSAITVD 
YLTVGGSASA GSDFAISSGP LSFAAGETSK TVDVFIQGDM VDESDESFTL ELSNPVNATV 
GSAGTVVILD DDAAPIINFV APPMQEGNSG TRPLTVSLML SAISGQAISV QYATHDNTAL 
GGSDYTTISG TLTIPAGQLT QRFIVNVNGD LIDESNETFT VTLSNPQNAS LLAPDAVATI 
IDDDGAPTIN ADAINVTEGD ANSVNAVFNV SLSNPSATAV TVNYSTLAGT AASGTDFTPA 
AGTLSFAPGE LSKTVTVVVL GDLVDEADET FTLVLSSATG GATLGSNGTA TIVDNDPTPS 
ASLSGLNSVV EGSGITTTLQ FTVTLSAASG RASSLQFATT AGTASAGSDF VGQNLMLNFA 
AGETQKVVSV AIVGDRVKEP NESFSVAISN PSNLTLGTAT ISVTIVDDDE WLVYMPYVVK