Gene Haur_4985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4985 
Symbol 
ID5736821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6320666 
End bp6321907 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content52% 
IMG OID641282152 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001547743 
Protein GI159901496 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATG CACTAACACA ACTAGGCTTT GCATCATGGC TGAGTGTTCT GATTGCCAGC 
ATCATTAAAG TAACCCTCAT TCTCGTGGGC GGTTCGGTTG GCATGATGTT CCTGACGTGG
TATGAACGCC GCGCTATTTC GTATATGCAA GACCGCCGCG GCCCCAACCG CGTTGGTCCT
CAAGGGTTGT TGCAACCAAT TTCCGAAGCG ATCAAAACGA TGACCAAGGA AGATGCAACG
CCCCGTGAAG CAGATAGAAT TGTGCACTTT TTGGCTCCAG TGGTGATGCT GGGGGCAACC
GTGCTTTCGT TTGCGGTCAT TCCGTGGGGG CGCATGTTCC CCGTCGATTT GAACGCCGCC
GTGTTGTTTG TGATCGCGAC TGGCGGTTTG CACAGCATTG GCATGATGAT GGCTGGTTGG
GGTTCCAACA ATAAATTTGC CTTGCTGGGG GGGATGCGCG GGGTTGCGCA ATTGATCAGC
TATGAAATTC CCCAAGTTAT GGCGATTATT CCCGTGGTGT TGATGACAGG CTCGATGTCG
CTGCAAAAGA TTGTCGAAGC ACAAAATGAC TTTGGCGGCT TGGGCTGGTT TGTCTTCTCA
CCAGTGGGCT TGTTGGGCTT TGCCTTGTTC TTCACAGCCA GTTTGGCCGA AGGCGAGCGC
ACACCCTTTG ATATTCCCGA AGCCGACTCA GAAATTATCG CAGGCTATAT GACCGAATAT
AGCGGCATGA AGTTTGCGGT TTTCTATCTC TCAAACTACA TGAGCAACCT AGCCGTCTGT
TTTATCACCG CGACCCTCTA CCTTGGTGGT GGCAACGGGC CTGGGGTTGA TGCGCTGGGT
GGCTTTGCTG GTGGTTTGCT TTCACTGATT TACTTCCTGC TCAAGTCCTT CGCGCTGTTC
TTTATCATGG TCTTGATCCG TGCAACAGTA CCACGTTTGC GGGTTGACCA ACTGATGGGC
TTTGCTTGGA AGTTCTTGCT GCCCTTGGTA TTGGTCAACA TTCTCAGCGC CTCGTTCTGG
GTAGCGCTGC TGCGCTGGGA TCAACAATGG CCGCAATTGA CCGAGTGGTT TGGTGCACCA
AGCACTGCTG ATGCCACCAA TTGGGGGCGT TTGGCAATTG CCGTAGTGCT GACCCTCTTG
ATCAATGCAG GGGCTGTCGC GCTGATTATG CGCCTGACCA ACCGCAACGT CCAGAAACAC
TTATACACAA CCGACGAAGA ACTTGCTCTT GGATTATCGT AA
 
Protein sequence
MADALTQLGF ASWLSVLIAS IIKVTLILVG GSVGMMFLTW YERRAISYMQ DRRGPNRVGP 
QGLLQPISEA IKTMTKEDAT PREADRIVHF LAPVVMLGAT VLSFAVIPWG RMFPVDLNAA
VLFVIATGGL HSIGMMMAGW GSNNKFALLG GMRGVAQLIS YEIPQVMAII PVVLMTGSMS
LQKIVEAQND FGGLGWFVFS PVGLLGFALF FTASLAEGER TPFDIPEADS EIIAGYMTEY
SGMKFAVFYL SNYMSNLAVC FITATLYLGG GNGPGVDALG GFAGGLLSLI YFLLKSFALF
FIMVLIRATV PRLRVDQLMG FAWKFLLPLV LVNILSASFW VALLRWDQQW PQLTEWFGAP
STADATNWGR LAIAVVLTLL INAGAVALIM RLTNRNVQKH LYTTDEELAL GLS