Gene Haur_4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4954 
Symbol 
ID5736790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6290556 
End bp6291071 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content46% 
IMG OID641282121 
Producttail collar domain-containing protein 
Protein accessionYP_001547712 
Protein GI159901465 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACC CATTTGTTGC TGAGATTCGG ATTGTTGGCT TCAACTTTGC TCCCCGTGGC 
TGGGCTTTTT GTGATGGTCA ATTATTGCCA ATTTCGCAAA ATACTGCATT ATTTTCATTG
TTAGGCACAA CCTATGGTGG TAATGGCAAA AGCAACTTTG CCCTGCCCGA TTTCCAAGGG
CGTTCCCCAA TGCATCAAGG ACAAGGGCCA GGCTTGAGTT TACGCGATCT GGGAGAAACT
GGTGGTTCTG AAACTGTCAC CTTATTACAA AGCGAAATCC CCAGCCACAA CCATATCTTT
AATTATGTTG GGATCGATGG CAATAATGCT GATCCAACGA ATAATCTCTT TGGTGGCAGC
GAATCAACCG ATGCCTTTCG CAATGCTCCC GATACAACGC TATCGCCGCA AGAACTTTCA
TTAACTGGTG GAGATCAACC GCATAATAAT ATGCAGCCCT ATCTAACCCT GAATTTTATT
ATTGCCCTAC AAGGGGTCTT CCCACCCCGC ACCTAA
 
Protein sequence
MADPFVAEIR IVGFNFAPRG WAFCDGQLLP ISQNTALFSL LGTTYGGNGK SNFALPDFQG 
RSPMHQGQGP GLSLRDLGET GGSETVTLLQ SEIPSHNHIF NYVGIDGNNA DPTNNLFGGS
ESTDAFRNAP DTTLSPQELS LTGGDQPHNN MQPYLTLNFI IALQGVFPPR T