Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4953 |
Symbol | |
ID | 5736789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 6290014 |
End bp | 6290511 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641282120 |
Product | tail collar domain-containing protein |
Protein accession | YP_001547711 |
Protein GI | 159901464 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.294288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAC CATTTTTAGC CGAAATTCGC CTGTTTTCGT TCGTATTTGC CCCCAAGGGT TGGGCTTTGT GTAATGGTCA ATTGTTGCCC ATTAACCAAA ATCAGGCCTT ATTTTCGCTT TTAGGTACAA CTTATGGTGG CAATGGTCAA ACAAATTTTG CTTTGCCCGA TTTACGTGGG CGCATTCCGA TCCATATGGG TGGTGGGCAT ACTTTAGGCG AACGGGCGGG TGAGCAAGCA CATACCTTGA GTATTACAGA ATTACCAACC CATAATCATA GCTTAGCCGC CTCAAACCAA CCAGCCAATA GCGCTAGTGG CTATCCGCCT GCCCGTTCGA GTGGGGTGAA TGGCTATACC ACCACAGGCC CAAATGGTAC GATGAACCCA CTGGCGGTTA GTAATGTTGG GGGCAGCCAA GCCCACCTGA ATATGGCTCC GTTTTTGACA ATTAACTTTT GTATTGCCTT ACAAGGCATC TTCCCATCGC AGACTTAA
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Protein sequence | MAEPFLAEIR LFSFVFAPKG WALCNGQLLP INQNQALFSL LGTTYGGNGQ TNFALPDLRG RIPIHMGGGH TLGERAGEQA HTLSITELPT HNHSLAASNQ PANSASGYPP ARSSGVNGYT TTGPNGTMNP LAVSNVGGSQ AHLNMAPFLT INFCIALQGI FPSQT
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