Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4943 |
Symbol | rplM |
ID | 5736779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6270298 |
End bp | 6270732 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641282110 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001547701 |
Protein GI | 159901454 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACTT ATAGCCAAAA AGCTTCGGAG ATTCAGCGCG AATGGCTGGT CGTCGATGCA CAAAATCAGG TGCTTGGTCG GCTCGCGACC CAAATTGCAA CCCTGATTCG CGGCAAACAC AAGCCAACCT ATACGCCAAG CATGGATGGC GGCGATTTTG TGATCGTGGT CAACGCTGAG AAAATTCGCG TTACCGGCGA TAAAGCTAAC CAAAAAATTT ACTATCGACA CTCGAACTTC CCTGGTGGTT TGAAGCGCAC CGCTTATAAA GTGATGATGC AAACCCACCC CGAGCGGATC ATTTACTTCG CGGTAAAAGG CATGTTGCCA CGCAATCGCT TGAGCCGCCA TATTATCAAA AAACTGAAGG TGTATGCTGG TGAGAGCCAT CCTCATGCAT CACAATCACC TAAAGTCTAT GCGGTGAAAG GTTAA
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Protein sequence | MKTYSQKASE IQREWLVVDA QNQVLGRLAT QIATLIRGKH KPTYTPSMDG GDFVIVVNAE KIRVTGDKAN QKIYYRHSNF PGGLKRTAYK VMMQTHPERI IYFAVKGMLP RNRLSRHIIK KLKVYAGESH PHASQSPKVY AVKG
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