| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4942 |
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| Symbol | |
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| ID | 5736778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 6269369 |
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| End bp | 6270187 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641282109 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001547700 |
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| Protein GI | 159901453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTA CTTTAGCATT GTGTTTTGAA TATCTCGGCA CTGCTTTTTG CGGCTCGCAA
TGGCAACCAG GCGGTCGCGC CGTGCAAACG GAGTTAGAAA CCGCTTGGCA ACGATTAACA
AGCGAAACTG GGCGTTGGAT TTTTGCCGGT CGCACCGATG CAGGAGTTCA CGCCCTAGCC
CAAGTCGCCC ATATCGTGAG CGATACGCCG CGCAGTTTGG ATACAATTGC CAAGGCAATC
AATGCCATTA CGCCGCCCGA TATCAGTGTT CACGAAGCAT GGGAGATGCC AACTGGCTTT
CACGCTCGCT TTAGTGCCCG TCAACGAACA TATCGCTATG TTTTTGATAG TGCACCTGCA
CCTTCAGCTA CGCTCTCTGG GCGGGTGCTG CGCCTCGATC ATCAACTAGA TTGGGCGGCG
ATGCAGGCGG CCTTGGATAC CCTGATTGGC ACACACGATT TTGCGGCGTT CGCTGGCGCT
GGTCACGAAG GCTCGACAAC TCGCACCTGT ATGTTGGCGC AATTACGCCC CGCAGAGTGG
CTTGGTCGCC CAGTGACTGT CCTGCATTTG CAGGCCAATG CTTTTCTCAA GCATATGGTG
CGCAATATCG TTGGTACGTT GCTGATGGTT GGCGATGGCC GGCTTTCATT GGAAGCTTGG
CAGGCAATTA TTGCCAGTCG CGACCGTCGT AACGCAGGCC CAACCGCGCC CCCACAGGGG
TTGTATTTAG AGTCGATTGG CTATGACCCA GCACTTCAGC CATTGGCGAC AAGTTCACGC
TGGGATGGCA CGACCTATTT TCGGACGTAT CAAGGCTAA
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| Protein sequence | MSRTLALCFE YLGTAFCGSQ WQPGGRAVQT ELETAWQRLT SETGRWIFAG RTDAGVHALA
QVAHIVSDTP RSLDTIAKAI NAITPPDISV HEAWEMPTGF HARFSARQRT YRYVFDSAPA
PSATLSGRVL RLDHQLDWAA MQAALDTLIG THDFAAFAGA GHEGSTTRTC MLAQLRPAEW
LGRPVTVLHL QANAFLKHMV RNIVGTLLMV GDGRLSLEAW QAIIASRDRR NAGPTAPPQG
LYLESIGYDP ALQPLATSSR WDGTTYFRTY QG
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