Gene Haur_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4938 
Symbol 
ID5736774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6266753 
End bp6267166 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID641282105 
Product30S ribosomal protein S11 
Protein accessionYP_001547696 
Protein GI159901449 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000118735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAC AAGCAAAAGC GGGAGCAGCT CGCCGCCCTC AACGCGGTCG TCGCCGTGAG 
CGTAAAAATG TGCCGCGTGG CCAAGCTCAC GTGCAAGCAA CCTTTAACAA CACGATCGTT
ACGATCACCG ACCCAGCTGG TAACGTGGTT TGCTGGAGCA GCGCTGGCGC AAGTGGCTTC
AAAGGCTCAC GCAAAAGCAC TCCCTATGCA GCCCAAGTAA CTGCTGAACA AGCAGCACGC
AAAGCCATGG ATAACGGCAT GCGCGTCGTC GAAGTGTATG TAAAAGGCCC AGGCGCTGGC
CGTGAATCAG CGGTGCGGGC ACTGCAAGCT ACTGGCTTGT CGGTTATTGC AATCACCGAT
GTTACGCCAA TCCCACACAA TGGTTGTCGC CCACCAAAGC GCCGCCGCGT GTAA
 
Protein sequence
MAKQAKAGAA RRPQRGRRRE RKNVPRGQAH VQATFNNTIV TITDPAGNVV CWSSAGASGF 
KGSRKSTPYA AQVTAEQAAR KAMDNGMRVV EVYVKGPGAG RESAVRALQA TGLSVIAITD
VTPIPHNGCR PPKRRRV