Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4928 |
Symbol | rpsH |
ID | 5736764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6260889 |
End bp | 6261287 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641282095 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_001547686 |
Protein GI | 159901439 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000649182 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGTTA ATGATCCAAT TGCCGACCTG CTGACACGCA TCCGCAACGC GGGTATGGCG CGTCACCAAA CGGTGACGAT TCCATTGTCG AAAATCAAGC GCGGTATTGC TGAAATTTTG CAAGCCGAAG GCTATATCAA GAGCTTTGAA GTTCAAGAAG GCACACCATT CTCAAACTTG GTGTTGACCT TGAAATATGC TGCTGACCGC AAGCCAGTCA TTACCGGCTT GAAGCGGGTT AGCCGCCCAG GTTTGCGGGT CTACACCAAG CGCAACGAGA TTCCTCGGGT GCGTAATGGT TTGGGCTTGA GCATCCTTTC AACTCCTAAG GGGTTGATGA CCGGTGATGC CGCTTGGAAA GCAGGCGTTG GCGGCGAAAT TGTTTGTTAC ATTTGGTAA
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Protein sequence | MSVNDPIADL LTRIRNAGMA RHQTVTIPLS KIKRGIAEIL QAEGYIKSFE VQEGTPFSNL VLTLKYAADR KPVITGLKRV SRPGLRVYTK RNEIPRVRNG LGLSILSTPK GLMTGDAAWK AGVGGEIVCY IW
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