Gene Haur_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4928 
SymbolrpsH 
ID5736764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6260889 
End bp6261287 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content51% 
IMG OID641282095 
Product30S ribosomal protein S8 
Protein accessionYP_001547686 
Protein GI159901439 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000649182 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTTA ATGATCCAAT TGCCGACCTG CTGACACGCA TCCGCAACGC GGGTATGGCG 
CGTCACCAAA CGGTGACGAT TCCATTGTCG AAAATCAAGC GCGGTATTGC TGAAATTTTG
CAAGCCGAAG GCTATATCAA GAGCTTTGAA GTTCAAGAAG GCACACCATT CTCAAACTTG
GTGTTGACCT TGAAATATGC TGCTGACCGC AAGCCAGTCA TTACCGGCTT GAAGCGGGTT
AGCCGCCCAG GTTTGCGGGT CTACACCAAG CGCAACGAGA TTCCTCGGGT GCGTAATGGT
TTGGGCTTGA GCATCCTTTC AACTCCTAAG GGGTTGATGA CCGGTGATGC CGCTTGGAAA
GCAGGCGTTG GCGGCGAAAT TGTTTGTTAC ATTTGGTAA
 
Protein sequence
MSVNDPIADL LTRIRNAGMA RHQTVTIPLS KIKRGIAEIL QAEGYIKSFE VQEGTPFSNL 
VLTLKYAADR KPVITGLKRV SRPGLRVYTK RNEIPRVRNG LGLSILSTPK GLMTGDAAWK
AGVGGEIVCY IW