Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4926 |
Symbol | |
ID | 5736762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6260082 |
End bp | 6260621 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641282093 |
Product | ribosomal protein L5 |
Protein accession | YP_001547684 |
Protein GI | 159901437 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000138257 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTC TTAAGGATGT CTATTTGAAG ACCGTGGCTC CTGCATTGTT CAAGGACTTT GGCTTTAAGT CCCCTATGCA AGTGCCTCGG ATTACCAAGA TCGTCATCAA CATTGGCTTA GGTGAAGCGT TGCAAAACCC CAAAGCGGTG GAAGCAGCTA TCGGCGACTT GACCATGATT GCAGGTCAAA AGCCAGTTGT AACCCGCGCT AAGAAATCGT TGGCAGCCTT CAAACTCCGC CAAGGTATGC CGATCGGCGC AATGGTAACC CTGCGCAACG ACCGGATGTA CGATTTCTAT GATCGTCTGG TCAACTTGGC GTTACCCCGT ATCCGCGACT TCCAAGGCTT AAGCCGCAAA TCGTTCGATG GTCGCGGAAA CTACAGTATC GGTATTCGGG AACAAATCAT CTTCCCTGAA ATCGAATACG ATAAAGTCGA TAAAATCCGT GGTCTTGAGG TGGCGATTGT TACCACCGCT CCAAACGACG AACAAGGCTT TGCTTTGTTG AAGGCGTTGG GGATGCCGTT TCGTGACTAG
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Protein sequence | MARLKDVYLK TVAPALFKDF GFKSPMQVPR ITKIVINIGL GEALQNPKAV EAAIGDLTMI AGQKPVVTRA KKSLAAFKLR QGMPIGAMVT LRNDRMYDFY DRLVNLALPR IRDFQGLSRK SFDGRGNYSI GIREQIIFPE IEYDKVDKIR GLEVAIVTTA PNDEQGFALL KALGMPFRD
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