Gene Haur_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4926 
Symbol 
ID5736762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6260082 
End bp6260621 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID641282093 
Productribosomal protein L5 
Protein accessionYP_001547684 
Protein GI159901437 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000138257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTC TTAAGGATGT CTATTTGAAG ACCGTGGCTC CTGCATTGTT CAAGGACTTT 
GGCTTTAAGT CCCCTATGCA AGTGCCTCGG ATTACCAAGA TCGTCATCAA CATTGGCTTA
GGTGAAGCGT TGCAAAACCC CAAAGCGGTG GAAGCAGCTA TCGGCGACTT GACCATGATT
GCAGGTCAAA AGCCAGTTGT AACCCGCGCT AAGAAATCGT TGGCAGCCTT CAAACTCCGC
CAAGGTATGC CGATCGGCGC AATGGTAACC CTGCGCAACG ACCGGATGTA CGATTTCTAT
GATCGTCTGG TCAACTTGGC GTTACCCCGT ATCCGCGACT TCCAAGGCTT AAGCCGCAAA
TCGTTCGATG GTCGCGGAAA CTACAGTATC GGTATTCGGG AACAAATCAT CTTCCCTGAA
ATCGAATACG ATAAAGTCGA TAAAATCCGT GGTCTTGAGG TGGCGATTGT TACCACCGCT
CCAAACGACG AACAAGGCTT TGCTTTGTTG AAGGCGTTGG GGATGCCGTT TCGTGACTAG
 
Protein sequence
MARLKDVYLK TVAPALFKDF GFKSPMQVPR ITKIVINIGL GEALQNPKAV EAAIGDLTMI 
AGQKPVVTRA KKSLAAFKLR QGMPIGAMVT LRNDRMYDFY DRLVNLALPR IRDFQGLSRK
SFDGRGNYSI GIREQIIFPE IEYDKVDKIR GLEVAIVTTA PNDEQGFALL KALGMPFRD