Gene Haur_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4915 
SymbolrplC 
ID5736751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6254193 
End bp6254831 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID641282082 
Product50S ribosomal protein L3 
Protein accessionYP_001547673 
Protein GI159901426 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0274485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATG GTATTTTGGG TCGCAAAATT GGCATGACCC AGATCTTCAC CGAAAAAGGT 
GAAACCATTC CTGTCACCGT GATCGAAGCT GGCCCATGTG TGGTCACCCA ACTTCGCACC
AAGGACAAGG ATGGCTATGA AGCAGTCCAA CTCGGCTTCG GCGAAATCAA ACCACGAAAA
GTAACGAAGC CAATTCAAGG ACACCTGAAA GCTGCTGGTC GGCTGGTTCG CTTCATGCGC
GAAGTGAAAA CCACTGACTT GAACGCACAC AATGTCGGCG ACGTGGTAAA TGTTGATATT
TTCCAAATCG GCGAAAAGAT TGATGTCGTC GGCACAAGCA AAGGTCGCGG TTTTGCTGGT
GTTGTTAAGC GCCACGGTTT CCGTGGTGGC CCAGCAACTC ACGGTCAAAG CGACCGCCAT
CGCGCCCCAG GTTCGATTGG TTCAGGCACC ACCCCAGGCC GCGTCTGGAA AAACATGCGC
ATGGCTGGTC GGATGGGCAA TGATCGCGTA ACCGTTCAAA ATTTGGAAGT GGTAAAAATT
GACCTTGAAC GCCACGTAAT CTTAGTTAAA GGCTCAGTGC CAGGCGCTAA GAATGGTTTG
GTGATGGTCT CACGGGCAGC TAAGGCCACG AAGAAATAG
 
Protein sequence
MLNGILGRKI GMTQIFTEKG ETIPVTVIEA GPCVVTQLRT KDKDGYEAVQ LGFGEIKPRK 
VTKPIQGHLK AAGRLVRFMR EVKTTDLNAH NVGDVVNVDI FQIGEKIDVV GTSKGRGFAG
VVKRHGFRGG PATHGQSDRH RAPGSIGSGT TPGRVWKNMR MAGRMGNDRV TVQNLEVVKI
DLERHVILVK GSVPGAKNGL VMVSRAAKAT KK