| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4913 |
|---|
| Symbol | |
|---|
| ID | 5736749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 6252531 |
|---|
| End bp | 6253733 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641282080 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001547671 |
|---|
| Protein GI | 159901424 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00837266 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC AAAAGTTTGA GCGGAATAAG CCCCACATCA ACATTGGGAC GATCGGGCAC
GTTGACCACG GCAAGACGAC CTTGACCGCT GCCATCACCA AAACCATGGC ACTGCGTGGC
CGCGCTGAAT TCCGCGCCTT CGACCAAATC GACAATGCTC CCGAAGAACG CGCTCGTGGG
ATTACGATTT CGATTTCACA CGTTGAGTAT GAAACCGAAA ATCGCCACTA CGCCCACGTG
GACTGCCCCG GCCACGCCGA CTATATCAAG AACATGATCA CCGGTGCTGC CCAAATGGAC
GGCGCAATCT TGGTGGTATC GGCACCCGAC GGCCCGATGC CCCAAACCCG CGAACACATC
CTCTTGGCTG GCCAAGTCGA AGTGCCTGCG ATGGTGGTCT TCTTGAATAA AGTTGACATG
ATGGACGACC CTGAGTTGCT CGAACTGGTT GAAATGGAAT TGCGCGAGTT GCTGAGCAAA
TACGGCTTCC CGGGCGATGA AATTCCGATC GTGCGTGGCT CAGCCAAAGG CGCATTGGAT
AGCGCATCAA CCGATGCAAG CCAACCAGAA TATCAATCAA TCCAAGAATT GATGCAAGCG
GTTGACGACT ACATCCCAAC GCCAGAACGC GCCATCGACA AACCCTTCTT GATGCCAATC
GAAGACGTGT TCTCGATCAA AGGCCGTGGC ACCGTGGTGA CCGGTCGGAT CGAACGCGGG
ATCGTCAAAG TTGGCGATAC GATTGAAATC ATTGGGATGG GACCAGACGT GCGCACGACG
GCCGTGACCG GCGTGGAAAT GTTCAAGAAG TTGCTCGATG AAGGTCGTGC TGGCGACAAC
GTTGGGGCAC TCTTGCGCGG GATTGAACGG ACGGACGTGG AACGCGGTCA AGTCTTGGCA
AAACCAGGCT CGATCAAACC ACACACCAAG TTCAAAGCCG AAGTCTACGT GTTGAAGAAA
GAAGAAGGTG GCCGCCACAG CCCATTCTTC AGTGGCTATC GCCCACAGTT CTACGTTCGG
ACAACGGACG TGACGGGTGC GATTGGCTTG CCCGAAGGCG TGGAAATGGT GATGCCAGGC
GACAACATCC AAATGACGGT GGAGTTGATC GTTCCGGTAG CTATCGAACA AGGCTTGAAG
TTTGCGATTC GTGAAGGTGG CCGCACCGTG GGTGCTGGCA TCGTGACCGA AATCATCGCA
TAA
|
|---|
| Protein sequence | MAKQKFERNK PHINIGTIGH VDHGKTTLTA AITKTMALRG RAEFRAFDQI DNAPEERARG
ITISISHVEY ETENRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAPD GPMPQTREHI
LLAGQVEVPA MVVFLNKVDM MDDPELLELV EMELRELLSK YGFPGDEIPI VRGSAKGALD
SASTDASQPE YQSIQELMQA VDDYIPTPER AIDKPFLMPI EDVFSIKGRG TVVTGRIERG
IVKVGDTIEI IGMGPDVRTT AVTGVEMFKK LLDEGRAGDN VGALLRGIER TDVERGQVLA
KPGSIKPHTK FKAEVYVLKK EEGGRHSPFF SGYRPQFYVR TTDVTGAIGL PEGVEMVMPG
DNIQMTVELI VPVAIEQGLK FAIREGGRTV GAGIVTEIIA
|
|---|
| |