| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4891 |
|---|
| Symbol | |
|---|
| ID | 5736726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 6226670 |
|---|
| End bp | 6229090 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641282057 |
|---|
| Product | MutS2 family protein |
|---|
| Protein accession | YP_001547649 |
|---|
| Protein GI | 159901402 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01069] MutS2 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAG AAGTTGTACT CCAAACCCTT GAGTTCGATA AAGTTCGTGA TCAGCTTGCA
CGTCATGCTG CGTTTAGCGC AAGCCGTGAG TTGGTTGCGC AACTCCATCC ATCAACCGAT
GGGCAGTGGA TTCTGCAGGC GCAAATTCGT ACTAGTGCCG CCCGTGCTTT AATTGAATCG
TTTGCCGATG TCTCAATTGG CGGTGCTCGT GATGTTCGCC CTGCGGTGGA ACATGCTCGT
CGTGGTGGGA TTCTTGAGGC GAGTCGGGTA CAAGAAATTG CCGCTACCTT GGGGGCGATG
CGGCGGTTGC GTGGCCAAGT TTTGCGCAAT CATCCCGATT TTGTGCCATT ACACCCTTTA
GCCGAGCAAC TGCCAAATTT GGCCACGCTG GAACATGAAA TTGAACGCAC AATCGGCCCT
GATGGCGAGG TATTAGATAG TGCTTCGGCT GAATTGGGCC GCTTACGTAG CGCCATTCGG
GTGGCGTTTA ATCGGTTGCA AGAGCGTTTG CAAGCAATTA TCAATTCGTC GCAATATGCC
GATGTGCTGC AAGAGCCAAT TATCACGGTG CGCGATGGCC GCTATGTCGT GCCAGTCAAA
GCCCCACAAC GACGGGCCTT GCGCGGGATT GTCCACGATC AATCATCGTC GGGCGCAACC
CTGTATATCG AGCCATTGGC TACGGTTGAG TTAAATAACC AGTGGCGCGA GCTGCAATTG
GCCGAACGCG AAGAAATCCA GCGCATTTTG GCGGCGCTCT CGGGCAAAAT TGCCAACGAA
GGTATGCCAA TTATTGTTGG GGTTGAGGCT ACCGCTGAAT TAGATTTAGC CTTTGCCAAA
GCCAAATATA GCATTAGCTT GCGTGCTAGC CAACCTGCGA TCAATACGCC AGTTCCTGCC
GATGATTTGC ACCCCGAATC AACTTTGTCA TTGCTCAAAG CCCGCCATCC CTTGCTCAAC
CAAGATCTGG TTGTGCCAAC CGATGTCTGG CTGGGCGGCC CAACGCAGAT GATTATTATC
ACTGGCCCGA ATACTGGTGG TAAAACGGTG GCGCTCAAAA CCGTTGGTTT GATGGCATTA
ATGGCCCAGG CGGGTCTGCA TATTCCGGCC CATCAAGGCT CGCGCTTACC TATTTTTGGT
AAAATTTTTG CTGATATCGG CGATGAACAA AGTATCGAAC AAAGCCTCTC GACCTTCTCC
TCCCACATGA CCAACATTAT CCAAATCTTG GATCGGGTAA CCCCCGATTC GTTGGTGTTG
TTTGATGAAT TGGGCGCTGG TACTGATCCA GTCGAGGGTG CTGCTTTGGC GCGAGCAATT
ATCGAACGCT TGTTGAATGT GGGATGTTTG GCGATGGCAA CCAGCCACTA TGCTGAACTC
AAGGCTTTTG CCTACAGCAC TGATGGGGTT GAAAATGCCT CGGTTGAGTT TGATGTTGAA
ACCTTATCGC CAACCTATCG ACTTTCAATC GGCTTGCCAG GCCGCTCGAA TGCTTTGGCA
ATTGCTGAAC GCTTGGGGCT TAAACGCGAC TTAATCGAAC GTGCTCGGGC AACGATTAGC
CGCGATAACG TCCAAGTTGA AGATTTGCTG GCCGCGATTC ATCGCGAACG CACAACCGCC
GAAAGTGAGG CTGCCCGCGC CTTGGAATTG CGCGAAGATG CCGAATTGGT GCGCGATCGG
CTGAGCCGCG AATTGTATGA GTTTGAACAG GATCGCGAAC AGCAATTAGC CAGTTACCAA
CGCCAACTTG ATGATGAATT GCGTGAAGTA CGAGCTGAAT TGCGCCGCCT ACGTGATGAA
TTTCGCTCAG TTTCGGTTAG CCGCCAATGG ATGGAACAAG CCGAACAACG CCTCAGCCGA
GTTGCCGAAC GGGTTCCCCA AACTCCAACT CCCCCCAAAG CCAAAGTTCC AGTTGTACCC
AAAGTTGCGC TTGCCCCACT TCCTCGCACA ATTCAAGTTG GCGATCAGGT GTTTGTGAGC
AGCGTGAAGC TTTCGGGCGT GGTGCTCGAT TTGGATGAAG AAGCCAACGA GGCCGAGGTT
CAATTGGGTG GCTTCCGCTT GCGGGTTGAT TTACGCGAGT TGCGGCTGGA AAAAGCGGGC
ACTAGTCCAA CCCAAGCGGT ACAAAAATAT GTACCTGTTC AGCGCATGAT CAATACTCCT
CCACCGCCGA ATGTTTCGAT GCAGCTTGAT ATGCGTGGTT GGCGAGCCTC GGATGTGGAA
AGTCAGCTCG ATCATTATCT CAACGATGCG TACCTCGCCA ATCTTTCAGA AGTGCGTTTG
GTTCATGGCA AGGGTACAGG GGCGCTGCGC CAAGTTGTAC GAACATTGCT CAAACGCCAT
CCCTTGGTCG AATCGTACAA TAGCGGTAGC CAAGGTGATG GCGGCGATGG CGTAACAATC
GCCAAAATGG TTGCTCGTTG A
|
|---|
| Protein sequence | MISEVVLQTL EFDKVRDQLA RHAAFSASRE LVAQLHPSTD GQWILQAQIR TSAARALIES
FADVSIGGAR DVRPAVEHAR RGGILEASRV QEIAATLGAM RRLRGQVLRN HPDFVPLHPL
AEQLPNLATL EHEIERTIGP DGEVLDSASA ELGRLRSAIR VAFNRLQERL QAIINSSQYA
DVLQEPIITV RDGRYVVPVK APQRRALRGI VHDQSSSGAT LYIEPLATVE LNNQWRELQL
AEREEIQRIL AALSGKIANE GMPIIVGVEA TAELDLAFAK AKYSISLRAS QPAINTPVPA
DDLHPESTLS LLKARHPLLN QDLVVPTDVW LGGPTQMIII TGPNTGGKTV ALKTVGLMAL
MAQAGLHIPA HQGSRLPIFG KIFADIGDEQ SIEQSLSTFS SHMTNIIQIL DRVTPDSLVL
FDELGAGTDP VEGAALARAI IERLLNVGCL AMATSHYAEL KAFAYSTDGV ENASVEFDVE
TLSPTYRLSI GLPGRSNALA IAERLGLKRD LIERARATIS RDNVQVEDLL AAIHRERTTA
ESEAARALEL REDAELVRDR LSRELYEFEQ DREQQLASYQ RQLDDELREV RAELRRLRDE
FRSVSVSRQW MEQAEQRLSR VAERVPQTPT PPKAKVPVVP KVALAPLPRT IQVGDQVFVS
SVKLSGVVLD LDEEANEAEV QLGGFRLRVD LRELRLEKAG TSPTQAVQKY VPVQRMINTP
PPPNVSMQLD MRGWRASDVE SQLDHYLNDA YLANLSEVRL VHGKGTGALR QVVRTLLKRH
PLVESYNSGS QGDGGDGVTI AKMVAR
|
|---|
| |