| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4863 |
|---|
| Symbol | |
|---|
| ID | 5736709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 6196878 |
|---|
| End bp | 6197540 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641282029 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_001547621 |
|---|
| Protein GI | 159901374 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.619442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTA ACCGCGCTCG TGTTCGCCGT TCACTGCCGG GTATTGCCAT CGAAGGCATG
CCTTTCATCG GAGCCGGCTT GGGTTTGACC GCCCTGACAG CGTTATTTAG TCGCAAGGCA
GCGATCTTAC CTCTCGCGCT CACAGCCTTT ACCAGCTATT TCTTCCGCGA CCCCGACCGC
GAATGCCCCG CCGATAGTTC AATTTTATAC GCCGCCGCTG ATGGCCACAT TACGATGATC
GATGAAGTTG ATGAACCTCG CTTTATTGGC GGCAAAGCCA CGCGAATCGT CACCTTCTTA
TCGGTATTCG ATGTGCATAT CAATCGCACC CCTTGCGCTG GCACAGTCCA ATATCGCGAT
TATGTGCAAG GCGAATTTCG CGCTGCCTGG GATGGCGAAG CCGATATCGT CAATGAACGA
GCCTATCTTG GGCTGGAAAC TGAGCATGGC CCAGTTTTGA TTAGCCAAAT TGCTGGATTG
GTAGCTCGTC GAATTATCAC ATGGCCAGTG GTTGGCGAAG AATTAGGCGC AGGCGAACGC
TTTGGCTTAA TTAAATTTGG CTCACGTACC GATATTTTGG TGCCAAGCGG CTCGATCAAC
GTCTTTGTCA AGAAGGGGCA GGCCATCAAA GGTGGGTTGA CCCAGATTGG AGCATGGCTG
TGA
|
|---|
| Protein sequence | MPSNRARVRR SLPGIAIEGM PFIGAGLGLT ALTALFSRKA AILPLALTAF TSYFFRDPDR
ECPADSSILY AAADGHITMI DEVDEPRFIG GKATRIVTFL SVFDVHINRT PCAGTVQYRD
YVQGEFRAAW DGEADIVNER AYLGLETEHG PVLISQIAGL VARRIITWPV VGEELGAGER
FGLIKFGSRT DILVPSGSIN VFVKKGQAIK GGLTQIGAWL
|
|---|
| |