Gene Haur_4833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4833 
Symbol 
ID5736678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6162466 
End bp6164187 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content52% 
IMG OID641281998 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_001547591 
Protein GI159901344 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00133424 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACC AACGTGTTAT GCGCCATTGG CAATTGCCAA CATCGGCCTC GCCCAGCCAA 
CTTCGCAGCC TCGGCGAGTA TCATCCATTG CTGGCAGCTA TTTTATGGAA TCGCGGTTGG
CGCGATGCGG CAGCGGTTGA GCAATTTCTC AATATCGATT GGAAACAACG CCACGATCCT
TTTTTGTTGC ACGATATGGA TCGCGCAGTC GAACGGATTA AGCAGGCAGT TGCCCAACAA
CAACGGGTCG TGGTCTACGG CGATTTCGAC ACCGACGGCG TGACCGGAGT TACCTTGTTG
ATGCAATTGT TCAAAGCCTT TGGTCTGCCA GTGCGCCCCT ACATTCCCAA GCGTGAGGGC
GAGGGCTACG GCCTGAATCT GGCGGCAATC GAAAAATTGC ATCAGGAAGG GCTTGATTTG
CTCGTGACGG TCGATTGTGG CATTAGCAAT GTTGCCGAAA TTAGCCGCGC CAACGAGTTG
GGCTTCGATA CGATTGTGCT TGATCACCAC CAGCCGCCCG CCAATTTACC ACCTGCCTAT
GCCGTGGTTG ACCCCAAACG CAGCGATTGT GCCTATCCCT TCAAGGGATT GTGTGGGGTT
GGCGTGGCCT TTAAATTGTA TGAAGCGTTG TGGCGGGCAG GCATTCAGCC TAACAACTTG
CGAGCACGCG ACATTCTCGA TGTGGTGGCA CTAGGCACAA TCGCTGACAT GATGCCCTTG
ACTGGCGAAA ATCGGGTGTT GGTGCATTTT GGTTTGCAGG CCATGAACGA AAGCCAACGC
CCAGGCTTAA AGGCGTTGTT GCGAGTAGCG GGAGTTGAAC AAGGCAAAAT TGATGCAAGT
AGCGTTGGAT TTCGGCTTTC GCCACGAATT AATGCCGCTG GCCGTTTGGT CGATGCGCGA
ATTGCCTATA GTTTGTTGCT GGCTCCCGAT CAAGCCCAAG CTGATGGCTT TGCCGACCAA
TTAAATAGCA CCAACATTGA GCGTCAAGCC CTAACCCGCG ATGTTCAGCA GGCCGCCCGC
GAATTAGCCC AAAATAGCGG CCAGCTTGAT CAACGTATTT TGGTGATTGT GGGCGAGGAT
TTTCATCATG GGGTGGTGGG CTTGGCAGCA GGCAAATTGG CCGAAGAATT TGCGCGGCCT
GTGCTGGTAA TGGGCAAAGA AGAAGATCGT AGTCGGGGTA GCGCTCGTTC GATTCCAGGC
TTTAATATTG TCAATGCCTT GGCTGAATGT GCCGATTTGT TTGAAAAATA TGGTGGCCAT
GCCGCCGCAG CTGGCTTTAC GATCGCCAAT GAGCATATTC CAGAGCTAGA ACAACGCTTG
CAAGCAATCG CCAATCAACA GATTACTGAT GCGATGATGG TGCCGCAGTT ACCAATTGAT
GCTGAGGCGA CGTTTGATCA ACTGAATCTT GACACGCTGG CGGTGCTCGA AAAAATGGCT
CCGTTTGGGC TAGAAAATCC CCAACCACGC TTTTGCAGTC GGCGCGTAAC GGTGATCGAG
GCGCGTGGGG TTGGTGCTGA AAATCAACAT TTGCGCTTGC GTTTGCAACA AGGTCGCCAT
TATCAAACCG CAATTGGCTT TAACCTTGGC GATTGGTTGG CAGAATTACC CAATGGTTCG
CAGATCGATA TCGTTTATAC TGTGGGCATC AACGAATGGA ATGGGCGCAG TTCGGTGCAA
CTTACGCTGG TCGATTTGCG CTTGAGTGAA GGGCAACGAT GA
 
Protein sequence
MLNQRVMRHW QLPTSASPSQ LRSLGEYHPL LAAILWNRGW RDAAAVEQFL NIDWKQRHDP 
FLLHDMDRAV ERIKQAVAQQ QRVVVYGDFD TDGVTGVTLL MQLFKAFGLP VRPYIPKREG
EGYGLNLAAI EKLHQEGLDL LVTVDCGISN VAEISRANEL GFDTIVLDHH QPPANLPPAY
AVVDPKRSDC AYPFKGLCGV GVAFKLYEAL WRAGIQPNNL RARDILDVVA LGTIADMMPL
TGENRVLVHF GLQAMNESQR PGLKALLRVA GVEQGKIDAS SVGFRLSPRI NAAGRLVDAR
IAYSLLLAPD QAQADGFADQ LNSTNIERQA LTRDVQQAAR ELAQNSGQLD QRILVIVGED
FHHGVVGLAA GKLAEEFARP VLVMGKEEDR SRGSARSIPG FNIVNALAEC ADLFEKYGGH
AAAAGFTIAN EHIPELEQRL QAIANQQITD AMMVPQLPID AEATFDQLNL DTLAVLEKMA
PFGLENPQPR FCSRRVTVIE ARGVGAENQH LRLRLQQGRH YQTAIGFNLG DWLAELPNGS
QIDIVYTVGI NEWNGRSSVQ LTLVDLRLSE GQR