Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4833 |
Symbol | |
ID | 5736678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6162466 |
End bp | 6164187 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641281998 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001547591 |
Protein GI | 159901344 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00133424 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAACC AACGTGTTAT GCGCCATTGG CAATTGCCAA CATCGGCCTC GCCCAGCCAA CTTCGCAGCC TCGGCGAGTA TCATCCATTG CTGGCAGCTA TTTTATGGAA TCGCGGTTGG CGCGATGCGG CAGCGGTTGA GCAATTTCTC AATATCGATT GGAAACAACG CCACGATCCT TTTTTGTTGC ACGATATGGA TCGCGCAGTC GAACGGATTA AGCAGGCAGT TGCCCAACAA CAACGGGTCG TGGTCTACGG CGATTTCGAC ACCGACGGCG TGACCGGAGT TACCTTGTTG ATGCAATTGT TCAAAGCCTT TGGTCTGCCA GTGCGCCCCT ACATTCCCAA GCGTGAGGGC GAGGGCTACG GCCTGAATCT GGCGGCAATC GAAAAATTGC ATCAGGAAGG GCTTGATTTG CTCGTGACGG TCGATTGTGG CATTAGCAAT GTTGCCGAAA TTAGCCGCGC CAACGAGTTG GGCTTCGATA CGATTGTGCT TGATCACCAC CAGCCGCCCG CCAATTTACC ACCTGCCTAT GCCGTGGTTG ACCCCAAACG CAGCGATTGT GCCTATCCCT TCAAGGGATT GTGTGGGGTT GGCGTGGCCT TTAAATTGTA TGAAGCGTTG TGGCGGGCAG GCATTCAGCC TAACAACTTG CGAGCACGCG ACATTCTCGA TGTGGTGGCA CTAGGCACAA TCGCTGACAT GATGCCCTTG ACTGGCGAAA ATCGGGTGTT GGTGCATTTT GGTTTGCAGG CCATGAACGA AAGCCAACGC CCAGGCTTAA AGGCGTTGTT GCGAGTAGCG GGAGTTGAAC AAGGCAAAAT TGATGCAAGT AGCGTTGGAT TTCGGCTTTC GCCACGAATT AATGCCGCTG GCCGTTTGGT CGATGCGCGA ATTGCCTATA GTTTGTTGCT GGCTCCCGAT CAAGCCCAAG CTGATGGCTT TGCCGACCAA TTAAATAGCA CCAACATTGA GCGTCAAGCC CTAACCCGCG ATGTTCAGCA GGCCGCCCGC GAATTAGCCC AAAATAGCGG CCAGCTTGAT CAACGTATTT TGGTGATTGT GGGCGAGGAT TTTCATCATG GGGTGGTGGG CTTGGCAGCA GGCAAATTGG CCGAAGAATT TGCGCGGCCT GTGCTGGTAA TGGGCAAAGA AGAAGATCGT AGTCGGGGTA GCGCTCGTTC GATTCCAGGC TTTAATATTG TCAATGCCTT GGCTGAATGT GCCGATTTGT TTGAAAAATA TGGTGGCCAT GCCGCCGCAG CTGGCTTTAC GATCGCCAAT GAGCATATTC CAGAGCTAGA ACAACGCTTG CAAGCAATCG CCAATCAACA GATTACTGAT GCGATGATGG TGCCGCAGTT ACCAATTGAT GCTGAGGCGA CGTTTGATCA ACTGAATCTT GACACGCTGG CGGTGCTCGA AAAAATGGCT CCGTTTGGGC TAGAAAATCC CCAACCACGC TTTTGCAGTC GGCGCGTAAC GGTGATCGAG GCGCGTGGGG TTGGTGCTGA AAATCAACAT TTGCGCTTGC GTTTGCAACA AGGTCGCCAT TATCAAACCG CAATTGGCTT TAACCTTGGC GATTGGTTGG CAGAATTACC CAATGGTTCG CAGATCGATA TCGTTTATAC TGTGGGCATC AACGAATGGA ATGGGCGCAG TTCGGTGCAA CTTACGCTGG TCGATTTGCG CTTGAGTGAA GGGCAACGAT GA
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Protein sequence | MLNQRVMRHW QLPTSASPSQ LRSLGEYHPL LAAILWNRGW RDAAAVEQFL NIDWKQRHDP FLLHDMDRAV ERIKQAVAQQ QRVVVYGDFD TDGVTGVTLL MQLFKAFGLP VRPYIPKREG EGYGLNLAAI EKLHQEGLDL LVTVDCGISN VAEISRANEL GFDTIVLDHH QPPANLPPAY AVVDPKRSDC AYPFKGLCGV GVAFKLYEAL WRAGIQPNNL RARDILDVVA LGTIADMMPL TGENRVLVHF GLQAMNESQR PGLKALLRVA GVEQGKIDAS SVGFRLSPRI NAAGRLVDAR IAYSLLLAPD QAQADGFADQ LNSTNIERQA LTRDVQQAAR ELAQNSGQLD QRILVIVGED FHHGVVGLAA GKLAEEFARP VLVMGKEEDR SRGSARSIPG FNIVNALAEC ADLFEKYGGH AAAAGFTIAN EHIPELEQRL QAIANQQITD AMMVPQLPID AEATFDQLNL DTLAVLEKMA PFGLENPQPR FCSRRVTVIE ARGVGAENQH LRLRLQQGRH YQTAIGFNLG DWLAELPNGS QIDIVYTVGI NEWNGRSSVQ LTLVDLRLSE GQR
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