Gene Haur_4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4700 
Symbol 
ID5736547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp6004945 
End bp6005970 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content50% 
IMG OID641281864 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001547459 
Protein GI159901212 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGAG TAGCAATCAA CGGCTTCGGT CGCATCGGTC GCCAAAGCTT CAAAACCATC 
TTGGATCACT ATCGCGATGA GTTGGAAATT GTTGCAATCA ACGACCTGAC CGATAACCAA 
ACGTTGGCCC ACCTGCTCAA GTACGATTCA ACCTATGGTT CATTCGATGG CGATGTTACC 
GCCACTGAAG ATACAATCAG CGTTACCTTC GCCGATGAAG AAGAGCCAAT GGTCATCAAG 
GCCTTGGCCG AGCGCGATCC GTCAAAATTA CCATGGGGTG AGCTCAACGT CGATATCGTA 
ATCGAATCGA CTGGGATTTT TACTGATGCG ACCAAAGCCA AAATGCACTT AGATGCAGGC 
GCGAAGAAAG TCATCATCAG TGCTCCCGCC AAGAACGAAG ACATCACCGT GTGTATGGGC 
GTGAACGAAG AAAATTACGA CGCTGAAAAA CATACGATTG TCTCGAATGC ATCATGTACC 
ACCAACTGTT TGGCTCCAGT AGCTAAAGTG TTGAACGATA AGTTCGGCAT TGTGCGTGGC 
TTGATGACCA CCATTCACTC ATACACGATG GACCAAAATT TGCAAGACGG CCCCCACAAA 
GATTTGCGCC GCGCTCGCGC TGCTGCTTTG AACATGGTTC CAACCACCAC GGGTGCTGCT 
AAAGCTGTAG CTTTGGTTAT CCCTGAGTTG AAGGGCAAAT TCGATGGTTT CGCCGTGCGC 
GTCCCAACCC CAACCGTTTC GATGGTTGAC TTTGTGGTTG AATTGGCCGA AGGCGCAACC 
GTTGAATCGA TCAACAATGC CTTTATTGAA GCCTCAGAAG GCGCAATGGA AGGCGTGTTG 
GGCGTAACCA ATGAAGAACT GGTCTCATCA GACTTCATCG GTACTTCATA CTCAAGCGTG 
GTTGACTTAA GCTTGACCAT GGCAATGGGC GACAAGATGG TCAAAGTTGT TGCTTGGTAC 
GACAACGAAT GGGGCTATGC TACCCGCATC GCTGACCTCA CCGCCTATAT CGCTGAAAAA 
CTCTAA
 
Protein sequence
MARVAINGFG RIGRQSFKTI LDHYRDELEI VAINDLTDNQ TLAHLLKYDS TYGSFDGDVT 
ATEDTISVTF ADEEEPMVIK ALAERDPSKL PWGELNVDIV IESTGIFTDA TKAKMHLDAG 
AKKVIISAPA KNEDITVCMG VNEENYDAEK HTIVSNASCT TNCLAPVAKV LNDKFGIVRG 
LMTTIHSYTM DQNLQDGPHK DLRRARAAAL NMVPTTTGAA KAVALVIPEL KGKFDGFAVR 
VPTPTVSMVD FVVELAEGAT VESINNAFIE ASEGAMEGVL GVTNEELVSS DFIGTSYSSV 
VDLSLTMAMG DKMVKVVAWY DNEWGYATRI ADLTAYIAEK L