| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4696 |
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| Symbol | |
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| ID | 5736543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5999673 |
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| End bp | 6000593 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281860 |
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| Product | integrase family protein |
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| Protein accession | YP_001547455 |
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| Protein GI | 159901208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGC AGCTAGAACA GTTTTTGGCC TATTTAACGG TTGAGCGCGG TTTGACCGGT
AACACAATTG CCGCCTACCG AACCGATCTT GACCAATTTG TTAACTTTAT TGTTGAACGT
AACACAGGCA GTTGGAGCAA CGTCTCCCGC GATGACCTGT TGGCGTTCTT GCTCTTTCTC
AAAGAAAAGC GCTACGCAAC CTCCACGATC GCACGTCGTA CTGCTGCAAT TAAATCGTTT
TTTGAATACC TGCAAGGCCA GCATAGTATC ACCACGAATC CAACTGAAAA CTTGGATTCA
CCCAAGGTTG ATCGGTTCTT GCCCAAGGCA ATTACGGTCG CCCAAGTTGA TGAACTGCTT
GAGTTACCTT TGACCACCAG CGGCCCTGAA GGCTTGCGCG ATAAAGCCAT GCTCGAAGTG
TTGTATGCCA CTGGCATGCG CGTTAGCGAG TTGGTTGCGC TCGATGTGGG CGATGTTGAT
CTGGCGATCC ACCAGATTCG CTGCTTGGGC AAGGCCAATA AAGAGCGGAA TCTGCCGATT
GTTGGCAGCG CCAGCACCGC CTTGGAAGAA TATCTCGATA TTGCCCGTGG CCAAATTAGC
CGTAACGGCG GCGATCCAGC CTTGTTTCTC AATCACCGTG GTAAGCGGCT TACCCGCCAA
GGCTTTTGGT TGATTTTGAA GGGCTACGCC GAACGCTTGG GGCTGAGCGA TCTGACACCG
CATACCTTGC GCCACTCGTT CGCAACCCAC ATGCTCAACC GTGGCAAAGA TCTGCGCGAG
GTGCAAGAGT TGCTGGGCCA TGCAAGTATT TCAACAACGC AAATTTATAC CCACGTAAGC
AACGACCGAG CCGTTAAATA CGATCAAGCA GCCCAACGAC CAACAGTCGC CAATGCTGCT
GAAGTCGAAT TTAGCGCCTA A
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| Protein sequence | MQQQLEQFLA YLTVERGLTG NTIAAYRTDL DQFVNFIVER NTGSWSNVSR DDLLAFLLFL
KEKRYATSTI ARRTAAIKSF FEYLQGQHSI TTNPTENLDS PKVDRFLPKA ITVAQVDELL
ELPLTTSGPE GLRDKAMLEV LYATGMRVSE LVALDVGDVD LAIHQIRCLG KANKERNLPI
VGSASTALEE YLDIARGQIS RNGGDPALFL NHRGKRLTRQ GFWLILKGYA ERLGLSDLTP
HTLRHSFATH MLNRGKDLRE VQELLGHASI STTQIYTHVS NDRAVKYDQA AQRPTVANAA
EVEFSA
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