Gene Haur_4692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4692 
Symbol 
ID5736539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5993766 
End bp5994848 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID641281856 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001547451 
Protein GI159901204 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG GGATTATTGG TTTACCCAAC AGCGGCAAAA CCACAGTTTT TAATGCATTA 
ACCCGCAATA CGGCAGAAAC AAATGCCTAT TCATCGGGCC AAATCGAGCC AAATATCGCC
ATGGTCAAAG TGCCCGACGA GCGGCTTGAT GCCTTGGCCA AAATGTACAA GCCCAAAAAA
CTCACGCCAG CCGATGTTCA ATATATCGAC GTGGCCGGGA TGAGTGGCAA TGCCCACGAA
AGCGGCGGCT TGAACCCACA GTTTCTGAAT TACATCAGCC AAGTTGATGC CTTGTTGCAT
GTGGTGCGAG CATTTGAAGA TGAAGGCGTG CCGCATCCCC AAGATAGCGT CAATGCTGCC
CGCGACCTAG CCTCGGTCGA TATGGAGTTG ATGTTCTCGG ATATGGCGAT TATCGAGCGG
CGTTTGAGCC GTTTGCGCGG CGAAGTGACC AAAATGGTCG GCAAAGACCG CGAAGTGCGC
CTGATGGAAC TCAACGCGCT CGAACGCTTA TACACTGGTC TCGAACAAGA TGTGCCGATT
CGCGCCCAAG AATTGAGCGA AGAAGAAGCC AAAGTGCTGC GCGGCTTCCA ATTTCTGAGT
GGCAAACCCA TGTTGGTGGT GGTTAACATC GACGAAAAGC AACTCAAAAC GCCGCCAGTC
TTGGCCTACG ACAAGCCCAA AACCGCAATT GTGACCTTGG CAGGCAAAGT TGAAGCCGAA
TTGGCTCAGC TCGAAGATGA AGATGCCCAA ATGTTTATGG ACGATTTAGG CATTACTGAG
CCAGCCCGCG ATCGCGTGAT CAAAGCTTCG TATACCATGA TGGGCTTGAT CAGCTTCTTG
ACCGCAGGCG ACGACGAAGT GCGAGCTTGG ACGATTCGCC AAGGCATCGG TGCGGCTGAA
GCGGCTGGCA CGATTCACTC CGACTTGCAA CGCGGCTTTA TTCGCGCCGA AATCGTGGCC
TTCGACGATT TGATGAAAGC TGGCGATATG GCTGCTGCCA AAAAAGCGGG CACAGTACGG
CTCGAAGGCA AAACCTACAT CGTCAAAGAT GGTGATATCG CCCACTTCTT GTTCAACGTG
TAA
 
Protein sequence
MKIGIIGLPN SGKTTVFNAL TRNTAETNAY SSGQIEPNIA MVKVPDERLD ALAKMYKPKK 
LTPADVQYID VAGMSGNAHE SGGLNPQFLN YISQVDALLH VVRAFEDEGV PHPQDSVNAA
RDLASVDMEL MFSDMAIIER RLSRLRGEVT KMVGKDREVR LMELNALERL YTGLEQDVPI
RAQELSEEEA KVLRGFQFLS GKPMLVVVNI DEKQLKTPPV LAYDKPKTAI VTLAGKVEAE
LAQLEDEDAQ MFMDDLGITE PARDRVIKAS YTMMGLISFL TAGDDEVRAW TIRQGIGAAE
AAGTIHSDLQ RGFIRAEIVA FDDLMKAGDM AAAKKAGTVR LEGKTYIVKD GDIAHFLFNV