Gene Haur_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4687 
Symbol 
ID5736534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5985459 
End bp5986493 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID641281851 
Productisopentenyl pyrophosphate isomerase 
Protein accessionYP_001547446 
Protein GI159901199 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0843845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA CTGCAACCGA AGGCCGTAAA ATCGATCATG TTAATATTGT GATTAAAGAA 
GATGTCAACG CCAAAGGCAT AACAACTGGC TTTGGGCGTT ATCATTTTGA GCATGATGCC 
CTGCCAGAAT TGGATATGCG CAGGATTGAT TTGAGCACAA CATTTTTGGG CAAGCAGCTC 
AAAGCACCAT TTTTAATTAG CTCGATGACC GGTGGTGCTG CGCCAACTGA GAAAATTAAT 
TTACAATTGG CCGAAGCCGC TCAAGCCTTG GGCGTGGCAA TGGGTGTTGG CTCGCAACGG 
GCAGCAATTT TCGACCCAAG TGTTGCTGCT TCGTATCAAG TGCGCCGCGT TGCACCTGAT 
ATTGCCTTGT TTGCCAATTT GGGCGCGGTG CAACTCAACT ATGGCTATGG CGTTGAACAA 
TGCCTACGCG CAGTTGATAT GATTCAAGCT GATGCGCTGA TTTTGCATTT TAATGCGTTG 
CAAGAGGCCG TCCAGCCTGA AGGCGACACC AATTTTGCAG GCTTATTGCA AAAAGTTGAG 
GCAATCTGTC GTGCTTTGCC CGTGCCAGTT ATCGCCAAGG AAGTTGGCAA CGGCATTGGA 
GCCAAAACTG CCAAGCGTTT AGTTGAAGCT GGCGTGCAGG CGATCGATGT GGCGGGGGCT 
GGTGGCACAA GTTGGAGCGA AGTCGAACGC TTCCGCCATC GCACTCAGGC AGGCCAACGG 
ATTGCTGCAA CCTTCGCAGG TTGGGGTATT CCAACCACCG AGGCGATTAA GCAAGTGCGG 
GCAGCGTTGC CAAACATTGG GATTATTGGT TCTGGTGGAT TGCGCAGCGG GCTAGATTTG 
GCCAAAGCGA TTGCGCTCGG CGCTGATTTA GGCGCATCTG CTGCGCCAAA TTTGTTGGCC 
CAAAACGATG GCGGCAGCGA AGCTGTCTAC GAAGCTATTT TGGCAGTAAT TGACGAATTG 
CGGATCAGCA TGTTTTGCAC TGGAGCGGCC AATCTGGCAG AATTACGCCA AACACCTTTA 
TACTCGGTTG GCTAA
 
Protein sequence
MTETATEGRK IDHVNIVIKE DVNAKGITTG FGRYHFEHDA LPELDMRRID LSTTFLGKQL 
KAPFLISSMT GGAAPTEKIN LQLAEAAQAL GVAMGVGSQR AAIFDPSVAA SYQVRRVAPD 
IALFANLGAV QLNYGYGVEQ CLRAVDMIQA DALILHFNAL QEAVQPEGDT NFAGLLQKVE 
AICRALPVPV IAKEVGNGIG AKTAKRLVEA GVQAIDVAGA GGTSWSEVER FRHRTQAGQR 
IAATFAGWGI PTTEAIKQVR AALPNIGIIG SGGLRSGLDL AKAIALGADL GASAAPNLLA 
QNDGGSEAVY EAILAVIDEL RISMFCTGAA NLAELRQTPL YSVG