Gene Haur_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4620 
Symbol 
ID5736467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5906105 
End bp5906368 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content53% 
IMG OID641281784 
ProductRNA-binding protein 
Protein accessionYP_001547379 
Protein GI159901132 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000138257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGCA CCCGCCGATT GCCCAAGGAT GCAGCTATGG AAGATTTATT GAAGTATATC 
GTCGAAGGCC TGATCGACAC CGACGAAATT AAAATTAGCA AACGCACTGG TCACCACAGC
ATTACCCTCG ATCTGCGCAT TCCCCAAAGC GAAGCAGGGA AGGTCATCGG GCGCAATGGG
CGTGTGGTCA AAGCCATTCG CGACGTATTG GGCATCGTTG GCGCTCGCCA AAACAAACGG
GTCCACCTAG AGGTTAATTC GTGA
 
Protein sequence
MPRTRRLPKD AAMEDLLKYI VEGLIDTDEI KISKRTGHHS ITLDLRIPQS EAGKVIGRNG 
RVVKAIRDVL GIVGARQNKR VHLEVNS