| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4615 |
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| Symbol | |
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| ID | 5736462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5901507 |
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| End bp | 5902412 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641281779 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001547374 |
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| Protein GI | 159901127 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTAC TTATTGGACT CGTTGTACTA GTGATTGTCT TTGGGGTTGG CTTTATGGTG
CTCAACCAAC GCCGCCAAAC TGATACGGTC TCTAGTCGGT TGGCGCAATT TACTGAGCGC
TCCATGAACC TTGAAGATCT GGAGTTGCAG TTGCCGTTTA TGCAGCGGGT TGTAACCCCC
ATGCTGAACA ATGTGTTTGT CAAGCTTGGT CAATCGGGCA AAGGCAACGA TAAACTGCGT
AATAATCTCA TGCTGGCTGG TAATCCTGGT AATTTAACGC CAACGATGTT TACTGGGATG
CGGATTTTTA TGGCCCTAGC GCTGTTTGGG GTCATCTTTT TAATCTGTAT GCTGGCCAAA
GTGCAAACTC TCAGCGCAAT TCAATGGTCG GGGGTTGGCG GAGCTTTGGG CTTTTTGCTT
CCAGCTATGT GGCTTGGTCG TCAAATTAAA AAGCGCCAGA AGTTGATTCT TAAGGCGTTG
CCCGATGCGC TCGATTTGCT TTCGATCAGT GTTACTGCTG GTTTAGGCTT CGATGCTGCA
CTCCAACGGG TGGCTGAAAA ATGGGATAAC GAGTTGTGCC GCGAGTTCCG CCGGGCGCTC
TCCGATATTC GTTTGGGTAC CCAACGCCAT GAAGCATTTC GCTCAATGAC TGTACGAACT
GGGGTTGAAG ACTTAACCTC GTTTGTTTCG GCGGTTATTC AAGCCGACCA ACTTGGGGTG
AGCATGGGCA AAATGCTCAA AATTCAATCT GACCAATTGC GGTTGCGCCG TCGTCAACGT
GCCGAAGAAG AAGCTCAAAA AGCTCCAATT AAGATGCTCT TTCCATTGGT GTTCTTGATC
TTCCCTTCGA TGTTCGTGGT TATCTTGGGG CCAGCTATTC CACGTTTGCT TGGTGGTGGT
CTCTAG
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| Protein sequence | MPLLIGLVVL VIVFGVGFMV LNQRRQTDTV SSRLAQFTER SMNLEDLELQ LPFMQRVVTP
MLNNVFVKLG QSGKGNDKLR NNLMLAGNPG NLTPTMFTGM RIFMALALFG VIFLICMLAK
VQTLSAIQWS GVGGALGFLL PAMWLGRQIK KRQKLILKAL PDALDLLSIS VTAGLGFDAA
LQRVAEKWDN ELCREFRRAL SDIRLGTQRH EAFRSMTVRT GVEDLTSFVS AVIQADQLGV
SMGKMLKIQS DQLRLRRRQR AEEEAQKAPI KMLFPLVFLI FPSMFVVILG PAIPRLLGGG
L
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