| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4613 |
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| Symbol | |
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| ID | 5736460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5899069 |
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| End bp | 5900472 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641281777 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001547372 |
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| Protein GI | 159901125 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCC TAAAGCGTAT TGCAGGAAAT ACGTCCCCAT CCTCGGCTTC CGAACCTACA
GCAGCAGCAC AATCGAGTGC TGCTGCCACA CGCCCTGATG GAGCTATTCC GCGCTCTGCT
TCAGTTTCTG CCCAAGATCG CCTACTTGAT GTTCGACATC GTGTCCAGCG ACGTTTGACT
GAAGAAGTTC GCGATGTTAA TAGCACAAGT GAAACCAAAA TCCGCCAAAC GGTCGAAGAT
CTCTTGAGTG TCGTCCTTGA TAGCGAAAAT ATCGTGTTAA GTCGGGTCGA ACGCCAACAA
TTGGTCGAAT CGTTGATGTC GGATATCGTT GGGCTTGGGC CGCTCGATTC GCTGCTCAAA
GATGAGAGCA TCTCGGAAAT TATGGTCAAT GGGCCAAACA AAATCTATAT CGAACAACGT
GGGAAGCTGA CGCTTTCTGG CACAACATTT ATCGATGATG AACACGCGAT GCGGGTGTTG
TATCGGATTG TGTCGCCTCT TGGCCGCCGG ATCGATGAAA GCTCGCCCAT GGTCGATGCC
CGGCTTCAAG ATGGCTCGCG GGTTAACGCA GTTATTCGGC CTATTTCATT GATTGGTCCA
GTCATCACGA TTCGGAAATT CTCCAAAAAG CCGCTTGGCC CCGAAGATCT GATTCGGTTT
GGGGCGATTA GTCGCGAAAT GATGGAGTTT CTTTCGGCCA GCGTTCGTGC TCGGATCAAT
GTGGTGGTTT CTGGTGGTAC CGGTTCGGGC AAAACGACCT TATTGAATGT GCTTTCCTCA
TTTATCCCTG AAGATGAACG TTTGATTACG GTTGAAAACG CTGCCGAACT TCAGCTCCAA
CAGGATCACG TGATTTCGCT CGAATCGCGG ACGGCCAATA TCGAAGGTAA GGGCGAAATT
TCAATCAACG ATTTGATTAT CAACTGCCTG CGGATGCGAC CTGAACGCAT TATCGTCGGC
GAATGTCGCG GTGGCGAGAC CTTGGCTATG TTGCAAGCAA TGAATACTGG CCACGAAGGC
TCGATGACCA CCCTACACGC CAATACCCCG CGTGACGCGA TTGCCCGGAT TGAAACTATG
TGTTTGATGT CGGGGATGGA TTTGCCGCTC AAGGCTATCC GTGAACAAGT TGCCTCGGCG
ATTGAGCTGA TTGTGCAACA AGCCCGACTT AAAGATGGTT CGCGGCGGGT TATGGCCATC
TCCGAAGTAA CCGGAATGGA AGGCGATTTG GTGGTGCTCC AAGATATTTT CATCTTTGAG
CAAACTGGCC TCGATGAACG TGGTAAGATT GTAGGGTCGC TCCGGCCAAC CGGGGTTCGG
CCACGCTTCC TTGATCGGTT TGAAGCCTTG AATATTTACC TGCCACCGAA CGTCTTTGGC
AATAGTTCAG AGCGCTTTTA CTAA
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| Protein sequence | MSLLKRIAGN TSPSSASEPT AAAQSSAAAT RPDGAIPRSA SVSAQDRLLD VRHRVQRRLT
EEVRDVNSTS ETKIRQTVED LLSVVLDSEN IVLSRVERQQ LVESLMSDIV GLGPLDSLLK
DESISEIMVN GPNKIYIEQR GKLTLSGTTF IDDEHAMRVL YRIVSPLGRR IDESSPMVDA
RLQDGSRVNA VIRPISLIGP VITIRKFSKK PLGPEDLIRF GAISREMMEF LSASVRARIN
VVVSGGTGSG KTTLLNVLSS FIPEDERLIT VENAAELQLQ QDHVISLESR TANIEGKGEI
SINDLIINCL RMRPERIIVG ECRGGETLAM LQAMNTGHEG SMTTLHANTP RDAIARIETM
CLMSGMDLPL KAIREQVASA IELIVQQARL KDGSRRVMAI SEVTGMEGDL VVLQDIFIFE
QTGLDERGKI VGSLRPTGVR PRFLDRFEAL NIYLPPNVFG NSSERFY
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