Gene Haur_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4612 
Symbol 
ID5736459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5897797 
End bp5899050 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content48% 
IMG OID641281776 
Productresponse regulator receiver protein 
Protein accessionYP_001547371 
Protein GI159901124 
COG category[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.936503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGT CCGATAAAAT TCGCGTACTA ATTGTTGACG ATATTGCAGA TACTCGTGAT 
AACCTCGAAA AATTATTGTT TTTTGAGAAA GATATGCAAG TTGTCGGCAA AGCAGCAACG
GGGCGCGAGG CCGTGACGCA GGCCAAGCAA ATTCAACCCG ATGTTGTCTT GATGGATATC
AACATGCCCG ATATGGATGG CATTGCAGCA ACTGAGGCAA TCATGGCGCA GGTGCCAAAT
ACGCAAGTCA TTATGATGAG CGTGCAAGGC GAAACCGATT ACCTGCGCCG TGCAATGTTG
GCTGGTGCGC GTCAGTTTCT CACGAAACCA GTTGGTGGCG ATGAACTCGC CAGTAGCATC
CGCGAAGTTT ATCGCTTGCA GCAAACCCAA CGACGCTTTG TGGTAGCGGC CCAACAGGTT
GAAGAACATG ATCAATCAAC TGGCCAAATT ATTGCTGTCT ATAGCCCCAA AGGTGGCACT
GGCAAGAGTG CAATTGCCTC AAATTTGGCG GTTGCATTAA AATTATTGCC TGGTAATCGT
AAAATTTGTT TGGTCGATGC AAGCTTGCTG TTTGGCGATA TTGCGGTGAT GTTCAACATC
AACAGTTCCA AAACGATCAA CGATCTCACC TCGCGGATTG ACGATCTTGA TAAGGATTTG
CTGAATGATG TGATGACGAC CCATGCCTCA CAGATCAAGG TGTTGTTGGC TCCGGCTAAC
CCACAAATGG GCGAACTAGT CACGGCTGAT CATGTCCGAA CAGTGCTTGA AGCCCTGCGG
CGAGAGTATG ATTATGTGGT GGTCGATACC CAATCATCCT TCCAAGATCA AACCATGGCC
GTATTAGATG CAGCCCATCG GATTGTTTTG TTGATGACGA TGGAACTCTC GTCGATTAAG
AATATTCGCC AGTTTTTGGA AGTGGCCGAG TTGCTTGGCT ACAACGATGA AAAACTGGTG
TTGGTCTTGA ACAAAGCCGA TGCTAAATTT GGCATTCGGG TCGATCAAGT CGAGGCCAAT
ATTCAACATA AGGTTGCGGC CCAAATTGGC AATGCGCCAT TTGAAATGGT CAATGCGATC
AACCGCGGCG TACCTTTAAT TATCGATCAG CCCCGGCATC AAATTTCAAT CGATGTGGCC
AACCTAGCGT ATCTCATCTC GGGAACAACC CGTACCAGCC GCGAAGGCGC ACGCCCGCAA
CAACCGAAAA AAGAAGAACC GAAGGGTCTC TTCGCCCGAT TGACCAAACG TTAG
 
Protein sequence
MAESDKIRVL IVDDIADTRD NLEKLLFFEK DMQVVGKAAT GREAVTQAKQ IQPDVVLMDI 
NMPDMDGIAA TEAIMAQVPN TQVIMMSVQG ETDYLRRAML AGARQFLTKP VGGDELASSI
REVYRLQQTQ RRFVVAAQQV EEHDQSTGQI IAVYSPKGGT GKSAIASNLA VALKLLPGNR
KICLVDASLL FGDIAVMFNI NSSKTINDLT SRIDDLDKDL LNDVMTTHAS QIKVLLAPAN
PQMGELVTAD HVRTVLEALR REYDYVVVDT QSSFQDQTMA VLDAAHRIVL LMTMELSSIK
NIRQFLEVAE LLGYNDEKLV LVLNKADAKF GIRVDQVEAN IQHKVAAQIG NAPFEMVNAI
NRGVPLIIDQ PRHQISIDVA NLAYLISGTT RTSREGARPQ QPKKEEPKGL FARLTKR