Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4612 |
Symbol | |
ID | 5736459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5897797 |
End bp | 5899050 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641281776 |
Product | response regulator receiver protein |
Protein accession | YP_001547371 |
Protein GI | 159901124 |
COG category | [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.936503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGT CCGATAAAAT TCGCGTACTA ATTGTTGACG ATATTGCAGA TACTCGTGAT AACCTCGAAA AATTATTGTT TTTTGAGAAA GATATGCAAG TTGTCGGCAA AGCAGCAACG GGGCGCGAGG CCGTGACGCA GGCCAAGCAA ATTCAACCCG ATGTTGTCTT GATGGATATC AACATGCCCG ATATGGATGG CATTGCAGCA ACTGAGGCAA TCATGGCGCA GGTGCCAAAT ACGCAAGTCA TTATGATGAG CGTGCAAGGC GAAACCGATT ACCTGCGCCG TGCAATGTTG GCTGGTGCGC GTCAGTTTCT CACGAAACCA GTTGGTGGCG ATGAACTCGC CAGTAGCATC CGCGAAGTTT ATCGCTTGCA GCAAACCCAA CGACGCTTTG TGGTAGCGGC CCAACAGGTT GAAGAACATG ATCAATCAAC TGGCCAAATT ATTGCTGTCT ATAGCCCCAA AGGTGGCACT GGCAAGAGTG CAATTGCCTC AAATTTGGCG GTTGCATTAA AATTATTGCC TGGTAATCGT AAAATTTGTT TGGTCGATGC AAGCTTGCTG TTTGGCGATA TTGCGGTGAT GTTCAACATC AACAGTTCCA AAACGATCAA CGATCTCACC TCGCGGATTG ACGATCTTGA TAAGGATTTG CTGAATGATG TGATGACGAC CCATGCCTCA CAGATCAAGG TGTTGTTGGC TCCGGCTAAC CCACAAATGG GCGAACTAGT CACGGCTGAT CATGTCCGAA CAGTGCTTGA AGCCCTGCGG CGAGAGTATG ATTATGTGGT GGTCGATACC CAATCATCCT TCCAAGATCA AACCATGGCC GTATTAGATG CAGCCCATCG GATTGTTTTG TTGATGACGA TGGAACTCTC GTCGATTAAG AATATTCGCC AGTTTTTGGA AGTGGCCGAG TTGCTTGGCT ACAACGATGA AAAACTGGTG TTGGTCTTGA ACAAAGCCGA TGCTAAATTT GGCATTCGGG TCGATCAAGT CGAGGCCAAT ATTCAACATA AGGTTGCGGC CCAAATTGGC AATGCGCCAT TTGAAATGGT CAATGCGATC AACCGCGGCG TACCTTTAAT TATCGATCAG CCCCGGCATC AAATTTCAAT CGATGTGGCC AACCTAGCGT ATCTCATCTC GGGAACAACC CGTACCAGCC GCGAAGGCGC ACGCCCGCAA CAACCGAAAA AAGAAGAACC GAAGGGTCTC TTCGCCCGAT TGACCAAACG TTAG
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Protein sequence | MAESDKIRVL IVDDIADTRD NLEKLLFFEK DMQVVGKAAT GREAVTQAKQ IQPDVVLMDI NMPDMDGIAA TEAIMAQVPN TQVIMMSVQG ETDYLRRAML AGARQFLTKP VGGDELASSI REVYRLQQTQ RRFVVAAQQV EEHDQSTGQI IAVYSPKGGT GKSAIASNLA VALKLLPGNR KICLVDASLL FGDIAVMFNI NSSKTINDLT SRIDDLDKDL LNDVMTTHAS QIKVLLAPAN PQMGELVTAD HVRTVLEALR REYDYVVVDT QSSFQDQTMA VLDAAHRIVL LMTMELSSIK NIRQFLEVAE LLGYNDEKLV LVLNKADAKF GIRVDQVEAN IQHKVAAQIG NAPFEMVNAI NRGVPLIIDQ PRHQISIDVA NLAYLISGTT RTSREGARPQ QPKKEEPKGL FARLTKR
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