Gene Haur_4597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4597 
Symbol 
ID5736442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp5879688 
End bp5880326 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content50% 
IMG OID641281759 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001547356 
Protein GI159901109 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.300981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATTC CCAACCATTT TGCCGAGCCA AATCCCGAGG TCTTGCACGA ATTAATCCAA 
CGCCAACCCT TGGCGACGAT TATTACGCTT GGCGCTGAAG GCATTAATGC CAATCATATT 
CCGCTGTACC TCGACCCTCA AGCGGGCGAG TTTGGCACAC TGTATGGCCA TGTGGCACGA 
GCCAATCATA TGTGGCAGGA GCATGATTCG CAACACGAAG TTTTGGCGAT TTTCCATGGA 
ACTGATAGCT ATATTACGCC AAGTTGGTAT GCTAGCAAAG CCCAAACTGG CAAAGTTGTA 
CCAACTTGGA ATTATGCTGT GGCCCATGCC TATGGCCCTT TGCAGGTGAT CGACGACCCA 
CAATGGTTGC GCCAACAGCT TGAGCAGCTG ACCAACCACA ACGAAGCTAG TTTTGAGCAT 
CAGTGGCAGG TTGCTGATGC GCCACACGAC TATACCGAGG CTCTGCTCAA AGCAATTGTT 
GGCATCGCTA TTCCAGTTAC TCGTTTGCTT GGCAAATGGA AAGTTAGCCA AAATCAGCCG 
CAGGCCAACC AACAAGGCGT AATCGCAGGT TTAGCGGCTA GCTCAGAGCC AAATGCCGCC 
GCCATGATTG ATCTGATCAA ACAACGCCAA TCGTCTTGA
 
Protein sequence
MYIPNHFAEP NPEVLHELIQ RQPLATIITL GAEGINANHI PLYLDPQAGE FGTLYGHVAR 
ANHMWQEHDS QHEVLAIFHG TDSYITPSWY ASKAQTGKVV PTWNYAVAHA YGPLQVIDDP 
QWLRQQLEQL TNHNEASFEH QWQVADAPHD YTEALLKAIV GIAIPVTRLL GKWKVSQNQP 
QANQQGVIAG LAASSEPNAA AMIDLIKQRQ SS