Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4579 |
Symbol | |
ID | 5736424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5858842 |
End bp | 5859744 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641281741 |
Product | ABC transporter related |
Protein accession | YP_001547338 |
Protein GI | 159901091 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.146186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGG TTGTTCAAAC CACAAATTTA ACGAAAACCT ATGGCAAAAA TCGTGGAATT GATAGTTTAA ATTTGCACGT GCAACAAGGT GAAGTTTTCG GGTATTTAGG CCCAAACGGC GCTGGCAAAA CCACGACAAT TCGCACTATT TTAGATTTTA TTCGGCCAAC CAGCGGCACA GCCCAGATTT TTGGCCTCGA TTCGCAGCGC GATTCGGTGG TAATTCACCA GAAAATAAGT TATTTGCCTG GCGAATTGGT GATGTATGAA AAAATGACTG GTATGGAGAT GTTGCATTAT TTTGGCCAGC TACGCGGCAA TGTGAGCCAG CAAGAAATTA AGCAATTGGC TGAACGTTTG GAGCTTGATT TAAAGCGACC AATTCGCACA CTCTCCAAGG GCAATAAGCA AAAAGTTGGG CTTGTGCAAG CATTTATGGG CAAACCTGAG CTTTTAATTC TCGATGAACC AACCAGCGGG CTTGATCCGT TGGTGCAGCA AACCTTTTAT CAACTAGTGC TCGAAGCCAA AGCCACTGGC CGCACGGTCT TTCTATCGTC GCACGTGATG TCGGAAGTTG ACCATATTTG CGATCGGGTA GGCATTATTC GGGCGGGCAA GTTGTTGGCA ATTGATACAG TTAAGGCACT CAAAGAGCGG GCGCGGCGCA CCATCGATCT CTATTTCACT CAGCCAGTTG AGCTGAGTGC CTTTGCCCAT ATTCCCAATA TTGATGGCTT GCAAGTGCTT GGCAACCATG TGCATTGCGC CGTAACTGGC TCGATTGACC AGTTGATCAA AACTGCGGCC CAATTTGAAT TACACGATGT GGTCAGCCAA GCCACCGATT TGGAAGATAT TTTCTTGGCC TACTACAAAG GAGAAATGAG CGATGTTGCG TAA
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Protein sequence | MTTVVQTTNL TKTYGKNRGI DSLNLHVQQG EVFGYLGPNG AGKTTTIRTI LDFIRPTSGT AQIFGLDSQR DSVVIHQKIS YLPGELVMYE KMTGMEMLHY FGQLRGNVSQ QEIKQLAERL ELDLKRPIRT LSKGNKQKVG LVQAFMGKPE LLILDEPTSG LDPLVQQTFY QLVLEAKATG RTVFLSSHVM SEVDHICDRV GIIRAGKLLA IDTVKALKER ARRTIDLYFT QPVELSAFAH IPNIDGLQVL GNHVHCAVTG SIDQLIKTAA QFELHDVVSQ ATDLEDIFLA YYKGEMSDVA
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