| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4567 |
|---|
| Symbol | |
|---|
| ID | 5736412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5845049 |
|---|
| End bp | 5846026 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641281729 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_001547326 |
|---|
| Protein GI | 159901079 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA AAGTCGCAGT GGTGACCGGA ATTACCGGCC AAGATGGTTC GTATTTAGCT
GAACATTTGC TGGCTCAAGG CTACCGCGTA GTCGGGATGC TGCGGCGTTC CAGCACAGTT
AATTTCGAGC GCATCAAACA TATTCAAGAT GATATCGAAC TGGTCACGGG CGATTTGCTC
GATGAAGTCT CGTTAATTAA TATGCTGCAA ACCTATCGAC CTTCCGAGGT TTATAACTTA
GCAGCCCAAA GCTTTGTCCA AACGTCGTGG TCGCAACCAG TCTTTACTGG CGAAGCTACG
GCCTTGGGCG TGACGCGGAT TCTTGACGCG GTGCGCACGG TCGATCCCTC GATTCGCTTT
TATCAAGCGA GTTCGTCGGA GATGTTTGGC AAAGTGGTTG AAGTGCCGCA AACCGAAAAT
ACGCCATTTT ACCCACGCTC GCCGTATGGG GTTGCCAAAG TTTATGGCCA CTGGATCACC
GTGAATTATC GTGAAAGCTA CAATATGTTT GCTTGCTCAG GCATTTTGTT CAATCACGAA
AGCCCACGCC GTGGCCGCGA GTTTGTCACC CGCAAAATCA CCGATGCAGT AGCGCGAATT
AAGCTTGGCT TAGCGACTGA ATTACGTTTG GGCAATCTCG AAGCCCAGCG CGATTGGGGC
TTTGCAGGCG ATTATGTCAA AGCCATGTAT TTGATGTTGC AACAAGATCA GCCCGATGAT
TTTGTGGTTT CAACTGGCGA AACCCACTCA GTACGCCGCT TCTGCGAGAT CGCGTTTGGC
CATGTTGGCT TAAATTATGC CGACTATGTA AAAATCGACG AACGCTTTAT GCGGCCTGCC
GAAGTGGACT TGTTGATTGG CGACCCAGCC AAGGCCAAGC GTATTTTAGG TTGGCAACCA
GAAACGCCCT TCGAGCAACT GGTGACCATG ATGGTCGAAG CTGACCTCGA ATTATTGAAA
CATGAATACC GTATCTAA
|
|---|
| Protein sequence | MTNKVAVVTG ITGQDGSYLA EHLLAQGYRV VGMLRRSSTV NFERIKHIQD DIELVTGDLL
DEVSLINMLQ TYRPSEVYNL AAQSFVQTSW SQPVFTGEAT ALGVTRILDA VRTVDPSIRF
YQASSSEMFG KVVEVPQTEN TPFYPRSPYG VAKVYGHWIT VNYRESYNMF ACSGILFNHE
SPRRGREFVT RKITDAVARI KLGLATELRL GNLEAQRDWG FAGDYVKAMY LMLQQDQPDD
FVVSTGETHS VRRFCEIAFG HVGLNYADYV KIDERFMRPA EVDLLIGDPA KAKRILGWQP
ETPFEQLVTM MVEADLELLK HEYRI
|
|---|
| |