| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4559 |
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| Symbol | |
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| ID | 5736404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5835706 |
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| End bp | 5836401 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641281721 |
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| Product | aspartate racemase |
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| Protein accession | YP_001547318 |
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| Protein GI | 159901071 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1794] Aspartate racemase |
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| TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.110424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACGA TTGGCCTCAT TGGCGGGATG AGTTGGGAAT CGAGCGTCAG TTATTATCAG
GTGCTCAACC AAACGATCAA ACAGCGTTTT GGGGGATTGC ATTCAGCCAA ATGTGTCTTG
TATTCAGTTG ATTTTGCTGA AATTGCCGCG TTGCAAAAGG CTGATCAATG GGAAACTGCT
GGGGAAATTT TGGCCCAAGC TGCTCGTAAT TTAGTCGCGG CTGGCGCTGA ATGTATTGTG
CTTTGCACGA ACACGATGCA TTTAGTGGCA ACTGCAATTG AGCAAGCTGT CGAAGTGCCA
TTTATTCATA TTGTCGATCC AACGGCAGCG GCGATTCAGC AGCAACAATT AACCACGATT
GGTTTGCTTG GAACCCGATT CACCATGGAG CACGATTTTT ATGCTGGGCG TTTGCGCCAA
CGCTATGGCT TAGCAGTCGT CACGCCTGAA CCCGAACAGC GCGATGAAAT TCATCGGATT
ATTTTCGATG AATTGTGCCT TGGCAAAATC GACGCTAGCT CCAAAACCTA CTATTTGGCG
GTGATTAACG ATCTGGTGGC AGCCGGAGCA CAGGGCATTA TTTTGGGCTG CACCGAAATT
GGCTTGTTGA TTAACCAAGC TGATTGCGAT GTTCCACTGT TCGATACCAC CCTGTTGCAT
GGTCAGGCAG CGGTCGCTTG GAGTTTAGCA AAATAG
|
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| Protein sequence | MKTIGLIGGM SWESSVSYYQ VLNQTIKQRF GGLHSAKCVL YSVDFAEIAA LQKADQWETA
GEILAQAARN LVAAGAECIV LCTNTMHLVA TAIEQAVEVP FIHIVDPTAA AIQQQQLTTI
GLLGTRFTME HDFYAGRLRQ RYGLAVVTPE PEQRDEIHRI IFDELCLGKI DASSKTYYLA
VINDLVAAGA QGIILGCTEI GLLINQADCD VPLFDTTLLH GQAAVAWSLA K
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