Gene Haur_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4548 
Symbol 
ID5736393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp5821111 
End bp5821788 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID641281710 
Producturacil-DNA glycosylase 
Protein accessionYP_001547307 
Protein GI159901060 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA CGATTCCTGC TTTGTGGCAA CCAGTGCTCG CCGACGAAAC CAGCAAGCCC 
TATTGGAACG ATCTCGAAGC ATTTGTCGCC GCCGAACGGG CTGAACAACA GGTGTTCCCG 
CCAGAAGATC AAGTTTTTTC AGCTTTAGAA TTAACCTCGC CTGAGCAAAC CAAAGTGCTG 
TTGTTGGGGC AAGATCCTTA CCATGGCCCA GGCCAAGCGC ATGGCTTATG TTTCTCGGTG 
CTGCCTGGGA TCAAAGCGCC GCCATCGCTC AAAAATATGT TCAAGGAACT CAAAACTGAT 
CTTGGTTGTG TTGTGCCTAA TAATGGCTAC CTGCTACCGT GGGCCAAACA AGGTATGTTA 
ATGATCAATG CGGTGATGAC GGTACGGGCG CATACCGCCA ATTCACATAA AAATCGCGGC 
TGGGAGAAAT TCACCGATGC CGTGATTCGC CAGGTCAATG CCAAACCAGA GCATGTAGTG 
TTTGTATTGT GGGGAGCATA TGCCCAAAAG AAGGCTAGCT TAATCGACAA CAGCCGCCAT 
ACGATTATTC AATCGGCGCA TCCCTCGCCA CTTTCGGCCG ATAATGGTTT TTTTGGCAGC 
CGCCCATTCT CTAAAATCAA CGCAGCCCTT GAGGCTCATG GTCAAAGCCA AATCGATTGG 
CAAATTCCAA ATTTATAA
 
Protein sequence
MALTIPALWQ PVLADETSKP YWNDLEAFVA AERAEQQVFP PEDQVFSALE LTSPEQTKVL 
LLGQDPYHGP GQAHGLCFSV LPGIKAPPSL KNMFKELKTD LGCVVPNNGY LLPWAKQGML 
MINAVMTVRA HTANSHKNRG WEKFTDAVIR QVNAKPEHVV FVLWGAYAQK KASLIDNSRH 
TIIQSAHPSP LSADNGFFGS RPFSKINAAL EAHGQSQIDW QIPNL