| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4474 |
|---|
| Symbol | |
|---|
| ID | 5736325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5720501 |
|---|
| End bp | 5721316 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641281637 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001547234 |
|---|
| Protein GI | 159900987 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3183] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTC TGCAAAAAGT TGATCAAGCA ACTATCTATG TTTATGTAAC CGATACTAAG
ATAATGCGGC CCATAAATCA AGGATATCAG AAATTAATAG TCCATTACGT TTATACTACA
AAAGTAAGAA ACTATCTAGT TATCGCATAT AAAGAAAAAG GCTATAAAAA AGAAAGATTC
ATAGATGATA ATAGTACAGC AGTAATTGTA AAAGACTGGG ATACTCCTGA TTTACCAGAT
AATCTGAAAA TTATTCAAAG TGATGAAATT ACGTCAACAT ATGAAATGAG ATATGGTTTC
AATTCTAATG AATGGATTGA AGAATTTAAT TCGATTATTG ACCCTTGGAT ACAATCAAAT
CCTGAACGCC TTATCCTAGA TCTACGAAAA CAATCTATAC AAAATGTATC TACTGTCGAA
GAAGATTGGT CAGCTGCAAT CCAAGCAAAT TTGTTTGACT TACCATCAAC ACAACCTCAC
CAACCAATAG CAAGCCCTGA GATTTTCATT GAGGGGGCAG AATATCAATC ATTAGTAACT
CGTTATGAGC GAAATCCCGA AGCCCGTCAA CGTTGTATTG AGCACTATGG ATCAACTTGT
GTTATTTGCC ATTTCGATTT TGCCAAAGTT TATGGAGAGT TAGCAAAAGG ATTTATTCAT
GTCCATCATC TTAAGCCACT AGCTACTATT GGCGAAAACT ACGAAGTTAA TCCCATTGAT
GATTTGCGCC CTGTATGTCC GAATTGTCAT GCTGTGATTC ATATGCGCAA AGAACCATAT
ACGATTGATG AAGTTCGTAA CATGCTTCAA CATTAA
|
|---|
| Protein sequence | MTILQKVDQA TIYVYVTDTK IMRPINQGYQ KLIVHYVYTT KVRNYLVIAY KEKGYKKERF
IDDNSTAVIV KDWDTPDLPD NLKIIQSDEI TSTYEMRYGF NSNEWIEEFN SIIDPWIQSN
PERLILDLRK QSIQNVSTVE EDWSAAIQAN LFDLPSTQPH QPIASPEIFI EGAEYQSLVT
RYERNPEARQ RCIEHYGSTC VICHFDFAKV YGELAKGFIH VHHLKPLATI GENYEVNPID
DLRPVCPNCH AVIHMRKEPY TIDEVRNMLQ H
|
|---|
| |