| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4467 |
|---|
| Symbol | |
|---|
| ID | 5736318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5713299 |
|---|
| End bp | 5714372 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641281630 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_001547227 |
|---|
| Protein GI | 159900980 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000156063 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGTT TAATTCGAGC TTTGTTGATT GTTGCCACCA TCGGCGCACT AGTTGTCGCG
TGTGTTGCAA CCCTGTTTCT GCGTGAGTTA ACCCAGCCTG CTGGCGAGAG CAATATTGCC
CAAGATTTTA CCATCGCTCC CAGCGAAAGT TTGGCGGTGA TCAGCAGCAA TCTGGAATCT
GAAGGTTTGG TGCGGCGGGC AATTGTTTTC CGCGTATTCG CCGATTTACG TAATGCCGAG
ACCGATTTGT ATCCTGGCAC CTACAAAATT AGCCCAAATA TGACGATCAA TCAGATTTTA
GAGATGTTTC GGGTTGCCCC AGAAGTTCAA ACTGCGGTGC GCTTTACCGT GCCTGAAGGC
TTGCGGATTG AAGAAATCGC GGCGGTGATT GAATCGACTG GCGTAGTTAG TGCCGATGAT
TTCTTGGCTG TGGCCCGCGA TGGCTCGCAA TTTAAGGCCG ATTATAGCTT TTTATCCAGC
TTGCCAGATA GCGCAACCTT GGAAGGCTAT CTCTTCCCTG ATACCTATGA AATCTTTTCT
GATGCAACCA GCGAAGAGAT TATTCGCAAA ATGCTCGATA CCTTTGCAAT TCGCTGGGCT
GATTCGCCGC TGAGCAGCGC CACGACCGGG CGTTCTGTCC ATGAAGTGGT GACTTTAGCC
TCGATTGTGC AGCGTGAAGC CAGCAATAAC GAAGAAATGC CACGGATTGC TGCCGCCTTC
TGGAATCGCC TGAAACCAGA ATTTGCTGGC AATCAGCTGG GAGCCGATCC GACAATTCAA
TATATTTTAG GCGAATCAGG CAATTGGTGG CCAAAGCTTG ATCAGCTAAC GGTTGAACAA
ATTAATAGTG CTGCTGGCCC TTATAACACA CGGGTCAACC CCGGCTTGCC ACCTGGGCCA
ATTAGTGCGC CTGGTTTGTT TGCCTTGCAA GCCGCTGCCT CGCCTGCCGC CGAAGATGTG
ACCTATTTTG TGACCAAGTG TGTGGCTGCT GGCGAACGCC CAACCCACAA CTTTACCAAC
GACTATAGCG AATTTTTGCA ATTTCAAGAA GAGTTTTTGG CGTGTCCCAA ATAG
|
|---|
| Protein sequence | MRRLIRALLI VATIGALVVA CVATLFLREL TQPAGESNIA QDFTIAPSES LAVISSNLES
EGLVRRAIVF RVFADLRNAE TDLYPGTYKI SPNMTINQIL EMFRVAPEVQ TAVRFTVPEG
LRIEEIAAVI ESTGVVSADD FLAVARDGSQ FKADYSFLSS LPDSATLEGY LFPDTYEIFS
DATSEEIIRK MLDTFAIRWA DSPLSSATTG RSVHEVVTLA SIVQREASNN EEMPRIAAAF
WNRLKPEFAG NQLGADPTIQ YILGESGNWW PKLDQLTVEQ INSAAGPYNT RVNPGLPPGP
ISAPGLFALQ AAASPAAEDV TYFVTKCVAA GERPTHNFTN DYSEFLQFQE EFLACPK
|
|---|
| |