| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4398 |
|---|
| Symbol | |
|---|
| ID | 5736248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5619026 |
|---|
| End bp | 5622307 |
|---|
| Gene Length | 3282 bp |
|---|
| Protein Length | 1093 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641281560 |
|---|
| Product | M protein-like MukB domain-containing protein |
|---|
| Protein accession | YP_001547158 |
|---|
| Protein GI | 159900911 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC TTAGTCGCAT TTTTCTGTAT CATTGGCATC GCTTCGATTG GCATGTGTTG
GATGTGCAGG ATAGTTTGTA TTTGGCGGGC CACAACGGTT CAGGCAAATC GTCGATTCTT
GATGCCTTGC AATTGGTGCT GGTGGCCGAT TTGGGTCGCG TGCGTTTCAA CAGCGCGGCC
CAAGATCGCT CGCAACGCTC GTTGGATAGC TATGTGCGCG GCAAAATTGG CGAGCAACAT
TGGCTGCGGC CTGGCGACAC GATTGGTTAT GTGGTGCTGG AGTGGACTGA AGATCTGAAG
CATCAAGCCT TTGTTAGCGG GGTTTGCTTG GAAGCTCGTG CCGCGACCCA AAGCGTTGAA
AAAACCTTTT TTATCTTTGA TGGCCACTTA AATCCTGATG TATTTATTGA GCAAGGCAAA
CCACGCACCC GCCGCGAAAT CAAAGCGATG GCGCGTAATC GCTCAACTGC CGAAAGTTTC
GATCAAACTG GCGAATATCA AGCGGCGTTG CTCAATCGGT TGGGCGGCTT GAATCAACGC
TTTTTCGATT TATTTCTGCG TGCCTTGACC TTCCAGCCAA TTCGTAATAT TCGTGAGTTT
GTTGAGCAAT GGCTGCTGGA GCCAAATTCG TTGGATGTTC ACACCTTGCA AAATGTGGTT
GAACGCTTAC GCGATTTGGA GCGAAAAGCT AAAGATGTTG AAGAACAATT AAAAAGCCTC
GGTGCTATTA TCAAAACCCA AGAAGAAGCC AAGCGCTTGC GTGGCCTGCA TGGGAAATTT
GAGATTCTGG CGGCTCACTA TAGCGTGGCG GCAATTCAGC AACAAATTAA TCAACAGCAA
CAACGATTAA TCGATACTCG CCGCGATTAC GAATTGAATC AGACTGATTT GGAACAACAA
CTTGGCTTAC AGCAAAATGC CCAAGCTGCC TTAGTTGAAG CCCAAGTTCA ATTAAGCCAA
TCTGATGTTG TGCGGCGTAA AAACCAACTT GCCGCTGAAA TTCAGCAATT GCAGCAACAC
ATTCAAAAAA TTAACCAACG TTGGCGACAA CTACAAGCCA AATTAATCCA AATTGCGGCA
TTATTGAATA AATTACAGCC AATTGCTGAG CAAGATTTGG TTAATTTATT GCAGCAGCCT
GAGCACATTC CCCAATCACA GCAAATTGTG CCTTTATTAC AACAACAGAG CACGGCGGCT
GGCTCTGCTT TGAAATTGCA ACTCCAGGCG ATGACCAGAA CCGACGATAA AATCTCGCGC
TTATTTGAAC AAGAAAGCCG CCTAAAACAA GAAATTACCC AGCTTGAGCA ATCGAATCGC
CAAAATCATT ATCCCCAAAA TGTGGAAAAT GTGCGTAAGT ACTTAAAATC AGCATTAAAT
ATTGAACTCT TTTTGCTTTG TGAGCTGTTA GAAATTCCTG ATGAACATTG GCAAAATGCG
GTTGAGGCAA TGCTTGGTCA ACGCCGTTTC AATATTATTG TCGAACCTAA ATATTATAGC
CAAGCCCTTG ATTTGCTTGA TCAGTTACGC GAAAAAGAGC GGATCTATGA TGTTGGTTTG
GTTGATTTAC AACAAGCTAG TGCAGAAGCT CGCCCAGCAC GACCATTATC ATTGGCGACC
AAAGTCAAAG CCAAAACTGG CTTGATTGAT AAATATATTG CGGCAATTTT AGGTGATATT
ATTACTTGTC AGCATGTGCA AGATTTGCGT CAACATCGCC GTGCGATTAC CGCTGAAGTG
ATGGTTTATC AAGAATGGAC AGCGCGTTCG ATTGATCCAC GGAAATTTCA GCCTTGGTTT
ATCGGTGAAC GCGCCCAACG CTCGCAAATT GAAAGCCGCC GCCAGCAATT AACCGAAATC
CAAGCCGAAT TGGCGATATT ACGCCCAGAA CAACAACGCC AGCGCCAATA TTATGATCAA
TTGGAAAAAT TACAACAACT TTTATTAGGC TTAGATTCGT ATTTCGAGGA AGAACTTGAT
TCAAGCGAAT TACAAACGAC ACTTGCTGAA TTGCAACGCG AACACGATAG CATTGATACT
AGCGGCGTGG CGGCACTTGA GGCCGAAGTT AAACGTTTAC ACATAATTCA TGAAGAATAT
GCCTTGAATA TTCGCCGTTT AGAGCGGATT ATTGGCACAC TGAATAATCA AATTACTCAG
ATTGAACAAC AACTTCAAGA AAACCAACAT CAATTGTTGA ATGCTCAAAG CCTGTTTGAG
CATACGCAGC AACGCTATCC CGACCAAATT GACGATGCAC TCAACGATTT TCAGCGCGAG
AACAATGAGC AAGCGCAATT TAGCCGTTTG CAAGAAACCG CCGAGCAACA AGGTCGTGGC
TATAATACCC GTTTTAACAA TACCCAAGAA CAATTACGCG AACAAGTTAT ACTCTATAAT
CGCGATTTTC GAGCGCGTGA ACTAGCCAAT ATCGAGCAAA CGAGCTTCCA AGAGAAACGC
GCTGAGCTTG AGGCTACTGA TTTACCGCAT TTTGTACAGA AAATTGCTGA AGCCAAACAT
GAAACTGAAA CCGAGCTACG CGAACATGTT CTGCATAAAT TGCGTGAAAA TATTGGTCGC
GCCAAAGCAG AGCTTGATCG GATTAATGAT GCTTTGCAAG GCTTAGATTT CAATGGCCAG
CGTTATCATT TTCGCTATGA AATTGCCGAT TCATTGCGTG ATTTTTATCA ATTGATTGAG
CAATCAGCCA ATGTTACTAG CGAGATGATT CAGGATAGTG AATTTTATCA GCAGCACAAA
GCCACGTTTG ATCGTTTCTT CCAATTGTTA ATTCAGCCTG GCCTAACCGA CCAAGAAAAG
CTTGAGCAGG CTCAAATTAC CGATTATCGG CGCTACTTGA GCTATGATAT TGATGTGATT
GAGCGTGATG GTACTCGTTC ACGCTTGAGC AAAATTATGG GTCAAACATC TGGCGGCGAA
ACTCAAACTC CGTTTTATGT GACGATTGCG GCCTCGTTTG TGCAGCTTTA TAAAATTAAT
GAACGTAGCA AACGCTCAAC CATTCGGATT GTGGCCTTCG ATGAAGCCTT TTCCAAAATG
GATCAAGATC GGATTGGCTC GACGCTTGAT CTATTTCACC ATTTTGGTTT ACAAATTATC
ACGGCCACGC CGATTGAGCG TTGCGAATAT TTAGTGCCCA AAATGTGTAC AACCTTGGTT
TTGACTGGCT TGAAAGATCG CCAGCAGCGG GTTTTGGTCG AGCCATATCG TAATTATGCA
GCTCGTCTAG AGGCGCTGAA TGCTGAATCT GAACAAAACT AG
|
|---|
| Protein sequence | MIKLSRIFLY HWHRFDWHVL DVQDSLYLAG HNGSGKSSIL DALQLVLVAD LGRVRFNSAA
QDRSQRSLDS YVRGKIGEQH WLRPGDTIGY VVLEWTEDLK HQAFVSGVCL EARAATQSVE
KTFFIFDGHL NPDVFIEQGK PRTRREIKAM ARNRSTAESF DQTGEYQAAL LNRLGGLNQR
FFDLFLRALT FQPIRNIREF VEQWLLEPNS LDVHTLQNVV ERLRDLERKA KDVEEQLKSL
GAIIKTQEEA KRLRGLHGKF EILAAHYSVA AIQQQINQQQ QRLIDTRRDY ELNQTDLEQQ
LGLQQNAQAA LVEAQVQLSQ SDVVRRKNQL AAEIQQLQQH IQKINQRWRQ LQAKLIQIAA
LLNKLQPIAE QDLVNLLQQP EHIPQSQQIV PLLQQQSTAA GSALKLQLQA MTRTDDKISR
LFEQESRLKQ EITQLEQSNR QNHYPQNVEN VRKYLKSALN IELFLLCELL EIPDEHWQNA
VEAMLGQRRF NIIVEPKYYS QALDLLDQLR EKERIYDVGL VDLQQASAEA RPARPLSLAT
KVKAKTGLID KYIAAILGDI ITCQHVQDLR QHRRAITAEV MVYQEWTARS IDPRKFQPWF
IGERAQRSQI ESRRQQLTEI QAELAILRPE QQRQRQYYDQ LEKLQQLLLG LDSYFEEELD
SSELQTTLAE LQREHDSIDT SGVAALEAEV KRLHIIHEEY ALNIRRLERI IGTLNNQITQ
IEQQLQENQH QLLNAQSLFE HTQQRYPDQI DDALNDFQRE NNEQAQFSRL QETAEQQGRG
YNTRFNNTQE QLREQVILYN RDFRARELAN IEQTSFQEKR AELEATDLPH FVQKIAEAKH
ETETELREHV LHKLRENIGR AKAELDRIND ALQGLDFNGQ RYHFRYEIAD SLRDFYQLIE
QSANVTSEMI QDSEFYQQHK ATFDRFFQLL IQPGLTDQEK LEQAQITDYR RYLSYDIDVI
ERDGTRSRLS KIMGQTSGGE TQTPFYVTIA ASFVQLYKIN ERSKRSTIRI VAFDEAFSKM
DQDRIGSTLD LFHHFGLQII TATPIERCEY LVPKMCTTLV LTGLKDRQQR VLVEPYRNYA
ARLEALNAES EQN
|
|---|
| |