| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4364 |
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| Symbol | |
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| ID | 5736224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5575793 |
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| End bp | 5577868 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281525 |
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| Product | shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_001547124 |
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| Protein GI | 159900877 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0103685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG TAGTCTGTAT CACGCTCGGA CGTTCGCGGC GTGACTTTAG CTTTACAACA
ACGCTGTTGG GCGAAGAGCT ACGGGTGCGC CGCATTGGAG CCGATGGCGA TGTCGAACGG
GTCAAGCAGT TGATTCGTGA GCACGATGGC AAGGTTGATG CGATTGCGCT TGGTGGTGTA
ATTGCCAACT TTCGGGTTGG CAAGGCCAGC TATCAACATA ACCAAGCGTA CACCATCGTC
AATCAAGCAC GAGTTACGCC AACCGCCGAT GGAGTGTTGC TCAAGGCAAC CCTCGAACGT
TGGACGGTGG CGCAGGCGGT TTCGCGTGAA CCAGGCCGCT TCAACTATCG TCGGGTTTTG
GTCTTTTCGG GGATTGAGCG CTATTCTTTA GCTGAATCGC TCAGCGGTTA TAACGTTGAT
TTGCGTTTTG CCGACCCCAA GGTGCATTAT GGTTTGCCCT TCACGTTGAG TTCGCTGAGC
CAACTGGAGC GCTACGCCAA ATTTGCCATG CCCGATTTGG CCAAAAAGCC CTATCGGCGG
ATTCACCCGA TTGGCAAGGG CGCGACCCAC GATAGCCGTC TCGAAAAAGA TTGTGCTTGG
GCCGATGTGT TAGCTGGTGA TTTTGCCTTT ATTCGGCGCT ACGCCCCGCA AGATCTGCGA
GGTCGCACGA TTTTGACCGA CGATCCATCG CCTGCTGAAA TTGAAGATTT GCGCCAGCGT
GGAGCACATA CCTTAATTAC GCTCACGCCC AAAATTAGCG AAGAACATCC GTTTGTTTCG
GCAGATGTGC TCGAAGCTAT GATTTTGGCC GTTACAGGCA AGCGCACGCT TGATGAAGCC
ACGGTATTGC AAATTACCGC CGATGCTAAT TGGGAGCCGC ACATCCAGCG TTTGACCAAC
GACGAAGAAT TAGAAAAATT TGCCTTTGTG ATTCACCCGC TCTCAACCAA ATTTATTTAT
AAAGATCCCC GCTTCAAAGT CTTCAAATTT GTGCCCCAAC GTTGGGTTGA ACGCGCCATG
GCCCACTTGC CACCGCTGTA TCTCTCGCGT ATGAAGGGTA TTAAATCAAC TGGTACAGGC
AAAGAAATCG AAGGCATTTT GCTGACCTTG GGCGCTACGC CCCGCGAATT GATGCGCCGC
CCAACTGCCT TTACCTATCG CCGTTTGATC AAGGCTGCCC GTATGGCCGA GCGCATGGGC
GCGAAGCTGA TGGGCTTGGG GGCATTCACT TCGGTGGTTG GTGATGCTGG CATCACGGTT
GCCCAAAAAT CCGATATTGG CATCACCTCA GGCAACTCGT TGACTGTGGC CGCCACCCTT
GAAGCCGCCA AACAAGCGGT CATTCTTATG GGTGGTCGAG TTGATCAAGG CACGGCAGTG
GTGATTGGGG CAACTGGTTC GATTGGCGCA GTTTGTTCGC GCCTGCTAGC CCAAGCGATT
GGCGATGTGG TTTTGATTGC GCCACGACCT GAGCGTTTGA TCGCCTTGAA AAAGCAAATC
GAGGCTGAAA CGCCCAACGC CAAAGTAACA ATTGCCACCA AAGCTGATGA TTATGTTGGC
AGTGCCGACT TAATTGTTAC CACCACCACC GCCCTCAACA CCAAAATTGT CGATATTGAG
CGCTTGAAGC CAGGTGCGGT GGTGTGTGAT GTGGCACGGC CACCCGATAT CAAAGAAGAT
GAAGCCGCCA AACGCCCTGA TGTGTTGGTG ATTGAATCGG GCGAAATCAC CTTGCCAGGC
GAGGTTGATT TTGGCTTTGA TATTGGTTTG CCGCCAGGTA CAGCCTATGC ATGTCTCTCG
GAGACGGCTT TGTTGGCGCT TGATGGCAAG TTTGAAGATT ACACGCTTGG CCGTAATATC
GAAATGGATC GGGTCAAGGA GATGTATCGC TTGTTCAAAA AGCATGGCCT CAAATTGGCT
GGCCTGCGCA CCTTCGACCA ATATGTAACC CCCGAAATGG TCGCCGAAAA GCGCCGATTG
GCCGATCATC GTCGGCACGA GCTGGGCTTG CCAGTGACCA CCGAAAGCGA AACCCTTACT
AGCGAAATGC CGCTGGAAGT CGGTGGCTCC AACTAA
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| Protein sequence | MKEVVCITLG RSRRDFSFTT TLLGEELRVR RIGADGDVER VKQLIREHDG KVDAIALGGV
IANFRVGKAS YQHNQAYTIV NQARVTPTAD GVLLKATLER WTVAQAVSRE PGRFNYRRVL
VFSGIERYSL AESLSGYNVD LRFADPKVHY GLPFTLSSLS QLERYAKFAM PDLAKKPYRR
IHPIGKGATH DSRLEKDCAW ADVLAGDFAF IRRYAPQDLR GRTILTDDPS PAEIEDLRQR
GAHTLITLTP KISEEHPFVS ADVLEAMILA VTGKRTLDEA TVLQITADAN WEPHIQRLTN
DEELEKFAFV IHPLSTKFIY KDPRFKVFKF VPQRWVERAM AHLPPLYLSR MKGIKSTGTG
KEIEGILLTL GATPRELMRR PTAFTYRRLI KAARMAERMG AKLMGLGAFT SVVGDAGITV
AQKSDIGITS GNSLTVAATL EAAKQAVILM GGRVDQGTAV VIGATGSIGA VCSRLLAQAI
GDVVLIAPRP ERLIALKKQI EAETPNAKVT IATKADDYVG SADLIVTTTT ALNTKIVDIE
RLKPGAVVCD VARPPDIKED EAAKRPDVLV IESGEITLPG EVDFGFDIGL PPGTAYACLS
ETALLALDGK FEDYTLGRNI EMDRVKEMYR LFKKHGLKLA GLRTFDQYVT PEMVAEKRRL
ADHRRHELGL PVTTESETLT SEMPLEVGGS N
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