Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4339 |
Symbol | |
ID | 5736199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5547014 |
End bp | 5547805 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641281500 |
Product | ABC transporter related |
Protein accession | YP_001547099 |
Protein GI | 159900852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAA CAGAAGCAGC GATGCCTGTT TTGCAATTGC GCCAAATTAG CAAACGCTTT GGTGCGGTTC AAGCCCTCTC CAACGTCGAT TTCGAGGTCT ACTCGAATGA AGTGGTGGCA TTGGTTGGCG ATAATGGCGC AGGCAAATCG ACGCTGATTA AAACCATCGC CGGAGCCTAC AAACCTGACG AGGGCGATTA TGTCTTTGAA GGCAAGGTCG TTTCAATCAA TAGCCCACGC GATGCCACCG ACCTCGGCGT TGAAACCGTC TACCAAGATT TGGCCTTGTG CGATAATCTC GATGTGGTTT CTAATCTCTA TCTTGGCCGC GAAAATGTGC GCCGCAGTGG GCTTAAATCC TTCGATCTGC TGAATGAAAC CGAGATGGAA CGCCGAGCGA CTGAAGTGCT GCGCGATCTG AGCGTCAAAA TTCCGAGTGT GCGGGTGCAA ATTGCCAATC TTTCGGGCGG TCAACGCCAA TCGGTGGCGG TTGCCCGTTC AGTCATGTGG AACTCCAAAG TTGTGCTGCT TGATGAGCCA ACGGCGGCGC TGGGCGTTGA GCAAACCCGC CAAGTCAAAG ATTTGATTAT GCGTTTGCGC GATCGTGGTT TGGCTGTGGT GGTAATTAGC CATAATGTTG CCGATGTGTT TGAAGTATCT GATCGAATTA TTGTGATGCG GTTGGGGCGG CGGGTCGCTA CCTTCCACAC CGCTCGCAGC ACCAACGAAC AAGTGATTGG CGCGATTACT GGGGCAATGC TGCCCAGCAA TGCCTATGGA GAGGCCGAAT GA
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Protein sequence | MTATEAAMPV LQLRQISKRF GAVQALSNVD FEVYSNEVVA LVGDNGAGKS TLIKTIAGAY KPDEGDYVFE GKVVSINSPR DATDLGVETV YQDLALCDNL DVVSNLYLGR ENVRRSGLKS FDLLNETEME RRATEVLRDL SVKIPSVRVQ IANLSGGQRQ SVAVARSVMW NSKVVLLDEP TAALGVEQTR QVKDLIMRLR DRGLAVVVIS HNVADVFEVS DRIIVMRLGR RVATFHTARS TNEQVIGAIT GAMLPSNAYG EAE
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