Gene Haur_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4339 
Symbol 
ID5736199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5547014 
End bp5547805 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID641281500 
ProductABC transporter related 
Protein accessionYP_001547099 
Protein GI159900852 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAA CAGAAGCAGC GATGCCTGTT TTGCAATTGC GCCAAATTAG CAAACGCTTT 
GGTGCGGTTC AAGCCCTCTC CAACGTCGAT TTCGAGGTCT ACTCGAATGA AGTGGTGGCA
TTGGTTGGCG ATAATGGCGC AGGCAAATCG ACGCTGATTA AAACCATCGC CGGAGCCTAC
AAACCTGACG AGGGCGATTA TGTCTTTGAA GGCAAGGTCG TTTCAATCAA TAGCCCACGC
GATGCCACCG ACCTCGGCGT TGAAACCGTC TACCAAGATT TGGCCTTGTG CGATAATCTC
GATGTGGTTT CTAATCTCTA TCTTGGCCGC GAAAATGTGC GCCGCAGTGG GCTTAAATCC
TTCGATCTGC TGAATGAAAC CGAGATGGAA CGCCGAGCGA CTGAAGTGCT GCGCGATCTG
AGCGTCAAAA TTCCGAGTGT GCGGGTGCAA ATTGCCAATC TTTCGGGCGG TCAACGCCAA
TCGGTGGCGG TTGCCCGTTC AGTCATGTGG AACTCCAAAG TTGTGCTGCT TGATGAGCCA
ACGGCGGCGC TGGGCGTTGA GCAAACCCGC CAAGTCAAAG ATTTGATTAT GCGTTTGCGC
GATCGTGGTT TGGCTGTGGT GGTAATTAGC CATAATGTTG CCGATGTGTT TGAAGTATCT
GATCGAATTA TTGTGATGCG GTTGGGGCGG CGGGTCGCTA CCTTCCACAC CGCTCGCAGC
ACCAACGAAC AAGTGATTGG CGCGATTACT GGGGCAATGC TGCCCAGCAA TGCCTATGGA
GAGGCCGAAT GA
 
Protein sequence
MTATEAAMPV LQLRQISKRF GAVQALSNVD FEVYSNEVVA LVGDNGAGKS TLIKTIAGAY 
KPDEGDYVFE GKVVSINSPR DATDLGVETV YQDLALCDNL DVVSNLYLGR ENVRRSGLKS
FDLLNETEME RRATEVLRDL SVKIPSVRVQ IANLSGGQRQ SVAVARSVMW NSKVVLLDEP
TAALGVEQTR QVKDLIMRLR DRGLAVVVIS HNVADVFEVS DRIIVMRLGR RVATFHTARS
TNEQVIGAIT GAMLPSNAYG EAE