Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4331 |
Symbol | |
ID | 5736191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5529940 |
End bp | 5530539 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641281492 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_001547091 |
Protein GI | 159900844 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.351495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGC GTTTGCCAGT GGTAGTTGGG GTTAGCGGCG CGAGTGGAGC GGCCCTTGCC GATCGGGTGA TCGAGCGCTT GATCGCTTTG GAACACCCGA TTGAGTTGAT TGCTACTTCA TCAGCTCGGA TCGTTTGGCG ACAAGAACAA GGCTATCCTT GGGCTGAGGC CGTGGCGCGT TGGCAGGCTT CAGGCCTGAT TACCGAACAT AATCCCAATA ATCAAGCGGC GACGATTGCT AGCGGCTCGT ATCCTGTCTA TGGCATGCTG ATTGTGCCCT GCTCGATGGG CACAGTTGCC GCCTTGGCGG CTGGTTTTGC CAACAATTTG CTGCTGCGGG TGGCCGATGT AACGCAAAAA GAGGGACGGC GCTTGGTCGT CGTCCCGCGT GAAACGCCGC TATCGAGCGT GCATTTGGAA AATATGCTGC GTTTATCGCA ACGCGGCGTG CGACTTGTGC CGCCAATGCC CAATTTCTAC GCTCGCCCAA CCACGGTTGC CGAGGTGGTC GATTTTGTGG CGGCTCGCGC CTTAGTCGCC TTGGGGCTAA GCCCTGAGCT TGATAGTAAC CAGCAATGGG CTGGCTTGGA GCTTGAATAA
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Protein sequence | MSKRLPVVVG VSGASGAALA DRVIERLIAL EHPIELIATS SARIVWRQEQ GYPWAEAVAR WQASGLITEH NPNNQAATIA SGSYPVYGML IVPCSMGTVA ALAAGFANNL LLRVADVTQK EGRRLVVVPR ETPLSSVHLE NMLRLSQRGV RLVPPMPNFY ARPTTVAEVV DFVAARALVA LGLSPELDSN QQWAGLELE
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