| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4309 |
|---|
| Symbol | |
|---|
| ID | 5736168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5502197 |
|---|
| End bp | 5504134 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641281469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001547069 |
|---|
| Protein GI | 159900822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGG CGTTTTCGTG GACTAATTTT TTGCTTGCAG CCAATGACCT AACGCTGGCA
GCAATTGTGG TCGTGGGGTT TTCGTTATTT GCCTATATTG CGCTGCACAA TTGGCGCAAT
GGGGTAGCTC GTTCGTTTTG TTTGTTGATT GTGGGGTTGA TGATTGTGCT GGGGGGCGCA
ATTCTCCAAC GTCAAGCGCA AACCGAAGCT ACTCGTCATG TGCTTTGGCG CATTCAATGG
GCAGGTATTA GCCTTGTGCC TGCGGCCTAC TACCATTTTG CCGAATCTCT GCTTCGTAGC
ACGGGTGATC CACGTATGTG GACGCGAGTG CTCTTGCCTT TATTCTATAC ATTTAGTGTT
GGCTTTTGGC TGGTCGCGCT GACGAGTAAC ATTTTGGTGA TTGATGTGCC AAGTCAGCCG
TATGTTGGCT TTGGCAAAGG GCCATTGTTT TGGTTCTTCA TTAGCTATTT CGTCACCGTG
TGTTTGCTCG GGGTTTGGTG TATTCGCCAA GCCCATCGGC GCTCGATTAC TCCGGCCAAT
CGGCGGCGCT TATGGTATTT AAGTACTTCT TTTTTAGCCC CATTTCTGGG TGTATTTCCC
TATTTGATTA TCGCCGCCAA TACTAAGGGC GTGCCATCCT GGCTTTCGTT GATGCTACTA
GGCGCAAGCA CCACCGGCGT GGGAGTGATG ATGACCCTCA TGACCTATAG TGTGGCTTTC
CATGGGGTGA TTGTGCCAGA TCGTTTGGTT AAGTATAATT TCTTACGTTA TGTATTATAT
GGGCCATTCG TTGGCGTAGC CTTGATTATT TGTTTGCAAT TGGTTGAGCC GATCAGTGCC
GCCACCGGCT TGCCGCGTGC AACGATCACG ATTTTTGGGG TAATGTTGAT GACGGTGATG
ATGCCAATTT TTATTGGGCG AATTCGGCCA ACCGTCGATA CCTTGATTTA TCGCCAAGAT
AGTGATGAAG TGCGTTGGAT GCGCCGCTTC GAGGAGCGAG CTTTCACCCG CCAAGATTTA
CGCCAATTGC TCGAAAATAC CTTGGTGGCG GTTTGTGGCT CGTTGCGGGT TGAATCAGGC
TTTGTGCTGG CTCCCAATGA CGAGCATTTT ACCGTTCAAG CATCGTGTGG CCCGCGCCGC
ACCATCAAGC AATTTTTGAA TGTTCATGAT ATCAACGAGC TATTGCAAAA TCTGCCCCAC
TTGGCCTTCA GCAACGATCG CATTCCCGAA GTTGAGGATT TTAGCATTCG CGATGGCTTT
TGTTTGTTGC CATTGTACAA TAGCCAGCAG GAATTATTGG GCGCAATTGG GATTGGTTGT
CGGCCAGAAC AACTGACCAT TCCCACTCGC CAGTTAATTG CAACCTTGGC GCATCAGATG
GAATTGGCGC TAACCCATAT GCAATTGCAG CAAAACCTAT TTAGCTCGTT GCGTGGGCTA
GCCCCCCAAA GCGCTTCGCT GTTACAATTA ACCAGTGAAA TTGAAACGCC AGTCACCGAA
AAAAACGATG CGCTGGCTGA TGTGGCCTTG CACCCTGAGT TTCCACAGTT GGTCAAGGAT
GCACTTTCAC ATTATTGGGG TGGCCCAAAA CTGAGCGATA GCCCATTGCT CGATTTGCGC
ACAGTGCGCC AATTGCTCGA TACCCAAGGT GGCAGCCCAA CGCGGGCTTT GCAAGGCGTG
TTACGCCAAG CGATCGAAAA CATTCGGCCT GAAGATCAAC TTGATCCAAC GGCTCCCGAA
TGGATGATTT ACAATATTTT AGAATTACGC TTTCTCAAAG GCTTACGGAT ACGCGAGATT
ATAGATAAGC TCGCAATGAG CGAATCGGAT TTTTATCGAA AACAACGGGT GGCGGTGGAA
GAAGTGGCCC GTCAGTTGGC GCTGATGGAA GACCAAGGCG ATCGCCCTTC CGGCTCGGTT
GAGCGACAAC GTCCCTAA
|
|---|
| Protein sequence | MVAAFSWTNF LLAANDLTLA AIVVVGFSLF AYIALHNWRN GVARSFCLLI VGLMIVLGGA
ILQRQAQTEA TRHVLWRIQW AGISLVPAAY YHFAESLLRS TGDPRMWTRV LLPLFYTFSV
GFWLVALTSN ILVIDVPSQP YVGFGKGPLF WFFISYFVTV CLLGVWCIRQ AHRRSITPAN
RRRLWYLSTS FLAPFLGVFP YLIIAANTKG VPSWLSLMLL GASTTGVGVM MTLMTYSVAF
HGVIVPDRLV KYNFLRYVLY GPFVGVALII CLQLVEPISA ATGLPRATIT IFGVMLMTVM
MPIFIGRIRP TVDTLIYRQD SDEVRWMRRF EERAFTRQDL RQLLENTLVA VCGSLRVESG
FVLAPNDEHF TVQASCGPRR TIKQFLNVHD INELLQNLPH LAFSNDRIPE VEDFSIRDGF
CLLPLYNSQQ ELLGAIGIGC RPEQLTIPTR QLIATLAHQM ELALTHMQLQ QNLFSSLRGL
APQSASLLQL TSEIETPVTE KNDALADVAL HPEFPQLVKD ALSHYWGGPK LSDSPLLDLR
TVRQLLDTQG GSPTRALQGV LRQAIENIRP EDQLDPTAPE WMIYNILELR FLKGLRIREI
IDKLAMSESD FYRKQRVAVE EVARQLALME DQGDRPSGSV ERQRP
|
|---|
| |