| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4292 |
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| Symbol | |
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| ID | 5736151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5479507 |
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| End bp | 5480067 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641281452 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001547052 |
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| Protein GI | 159900805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0310009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAATGGA ACATCAAGAG CCGTAATATT AAGCTACACG ATGCGCAAAA AGCATTTATT
CAAGAAAAAT TAGGCAAATT AGAACGCTAC CTCGACGGAA TTAACGATTG GAAAGTGGAA
TGCCGTTTTG AAACACTCCG TGGTAGCGGC GAAACATATA CTGTTCAAGC AACGCTGTTG
GCCGATCATG GGATCATTCT ACGGGCAGAA GAACGCGATC GTGAATTGTA TGCTGCGGTT
GAGGCAGTTC ACGATAATTT GCAACGCCAA ATTCGCCGCT TCAAGGAAAA ACATTATCGC
CGTGGCAAAT TGCGCCGCAC TGCTGGCGAA ATTATTGCCG CTCCGCTGCC AGCCTTGCCC
GAAGATGCCG AACAAGCCGA AGAACGCCAA ATTATTCGCG CCAAGGAGGT AACTCTGCGG
CCTATGTTTA GCGATGAAGC GATCGAACAA ATGGAGTTGC TCGGCCACTC GTTCTTTGTG
TTCCGCGATG CTGAAACCGA AAAAATTCAA GTCGTCTATC GCCGTAACGA TGGCAATTAT
GGCTTGATTA TGCCCCGCTA A
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| Protein sequence | MEWNIKSRNI KLHDAQKAFI QEKLGKLERY LDGINDWKVE CRFETLRGSG ETYTVQATLL
ADHGIILRAE ERDRELYAAV EAVHDNLQRQ IRRFKEKHYR RGKLRRTAGE IIAAPLPALP
EDAEQAEERQ IIRAKEVTLR PMFSDEAIEQ MELLGHSFFV FRDAETEKIQ VVYRRNDGNY
GLIMPR
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