Gene Haur_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4290 
Symbol 
ID5736149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5478175 
End bp5478897 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID641281450 
ProductNUDIX hydrolase 
Protein accessionYP_001547050 
Protein GI159900803 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00680151 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA CTGCTGAAAA TTACGATGCG ACAAAATATG AGCGGCCTTC TGTAACGGTC 
GATGTGGTGA TATTTGGCTT GCGCAGTGGC CGTTTGCATG TGCTGATGGT GCAGCGGAAA
CATTGGCCCT ACGCTGAACA TTGGGCGATT CCAGGTGGCT TCGTCAACAT GGATGAATCG
TTGGAAATGG CTGCTCGGCG CGAGTTGGAG GAAGAAACAG GCGTTCACGA TGTGTATATG
GAGCAGCTGT ATACTTTTGG TGATCCTGGG CGCGACCCAC GAACCCGCGT GATTAGTGTG
GCCTATTTTG CCTTAATTCG TACCGAAGAG CAAGCCTTGC AAGTTTCCGA CGAATCGAAT
GATGTTTGTT GGTTTCCGGT CGATGAACTG CCCAAGGACT TGGCCTTCGA TCATGAAAAG
ATTCTGCGCT TTGCAATCGA TCGCTTGCGC TCAAAGCTGG AATACACCAC TTTGGCCTTT
CAATTGCTCC CCAAGGAATT TAGCTTGCCC AAACTCAAGC GGATTTACGA AGAGATATTG
GGCGAGCAGC TCGATAAAGC CAATTTCTAT CGCAAACTGC GTGATTCCGA TTTGCTCGAA
GATACTGGCA AATTGCTGAA TAGCCGAGGC CGACCAGCTC GCCTCTATCG CTTCCGCGAT
TCACGCATCG AGGGCGATTT TGTGTTTCGC TACCGCGAAG CCAAAAAGAA GGACGAACAA
TAA
 
Protein sequence
MTETAENYDA TKYERPSVTV DVVIFGLRSG RLHVLMVQRK HWPYAEHWAI PGGFVNMDES 
LEMAARRELE EETGVHDVYM EQLYTFGDPG RDPRTRVISV AYFALIRTEE QALQVSDESN
DVCWFPVDEL PKDLAFDHEK ILRFAIDRLR SKLEYTTLAF QLLPKEFSLP KLKRIYEEIL
GEQLDKANFY RKLRDSDLLE DTGKLLNSRG RPARLYRFRD SRIEGDFVFR YREAKKKDEQ