Gene Haur_4286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4286 
Symbol 
ID5736145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5473315 
End bp5473989 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID641281446 
ProductHhH-GPD family protein 
Protein accessionYP_001547046 
Protein GI159900799 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.507198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATC TCCAAGCTAA AGCCGATCTG GTTTATCGCG AGTTAGTCGC CTTGCATGGA 
TTTAACCAAC TTGTGCCACG CCGCGAACCA ATGCACGAGC TAATTTCGAC CATGCTTTCG 
CATCAAACCA CTGAGGCCAA CGAAGAGCGT GGCTACCAAA ATCTCCGCGC AACCTTTCCA 
ACCTGGGAAG CCATCTTGGC AGCACCAGTC GAGGCCGTCG CCGAAGCGAT CAAGCCAGCC 
AATTACGCTC CCGCCAAAGC CAACAATATT CAAGCTGCCT TGGCCAAAAT TCTGGCTGAG 
CGCGGCGAAA TTTCGATTGA TTTTCTGGCT GAGCTATCGA CCGAAGCAGC AATGGCCTGG 
CTGACTGGGT TGCGTGGCGT TGGCCCGAAA ACCGCCTCTT TAGTGCTGTT GTTTTGTTTT 
AGCAAGCCGA TTTTGCCTGT TGATACCCAT GTGCATCGAG TCAGCCAACG CTTAGGCTTG 
GTCAAGGCCA AAACACCCAC CGAAGCCCAC GAAATTCTGT GGCAATTGCT GCCGCATGAC 
GCTGAATGGC TGTTTAACTA TCACGTTGCA CTATTACGCC ACGGCCAACG CATCTGCTTA 
GCCAAACGAC CACGTTGCAA CCAATGCCCA CTGACCGCGC AATGTTTGTG GTATCAAGCT 
AATCAGGCTG AGTAA
 
Protein sequence
MQDLQAKADL VYRELVALHG FNQLVPRREP MHELISTMLS HQTTEANEER GYQNLRATFP 
TWEAILAAPV EAVAEAIKPA NYAPAKANNI QAALAKILAE RGEISIDFLA ELSTEAAMAW 
LTGLRGVGPK TASLVLLFCF SKPILPVDTH VHRVSQRLGL VKAKTPTEAH EILWQLLPHD 
AEWLFNYHVA LLRHGQRICL AKRPRCNQCP LTAQCLWYQA NQAE