Gene Haur_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4285 
Symbol 
ID5736144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5472160 
End bp5473185 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID641281445 
Productcytochrome oxidase assembly 
Protein accessionYP_001547045 
Protein GI159900798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.367263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TGCGTGTTCC GACCGACCAA GTGCGTTTTT CTTGGCGGCG TTTAGATCGC 
TTTCAAAAAT GGGCGATGAT TACCACGATT GCTACTTATT TCTTGATTTT TGTAGGCGGG
ATTGTTCGCG CTTCGGGGGC TGGTTTGGGT TGCCCAGACT GGCCAAAATG CTTTGGCTAT
TGGATTCCAC CTGCCAGCGC CGACATGATT GCCCAGCATG GCTTCGATGC TAGCCAATTC
AACCCAACCT TGATGTGGAT CGAATATATT AACCGTTTGA TCGGCATGTT GATTGGCTTT
TTCTTGTTGA TCACAACATA TCTGATGTTG CGTCACTATC GCAAATCGAA GCGGGTGTTT
TGGTCGGTAC TCGGTGCACT AGCCCTGACC TTATTCCAAG GCTGGCTCGG TGGCAAGGTC
GTACACCTCG AACTCGAAGG CTGGATCGTG ACCTTGCATA TGATTTTGGC CTTGGTGATT
GTCGGTTTGT TGTTGTATGC AACCGTTTGC GCCTTCTTCC CCAATGGCCG ACCAATCGCT
AATGTTCCAG CCGAACGGCG CACGGTAGCC CGCTGGGGTC AGGCGTTGGT TGGCTTTGGC
TTGGTTCAAT TGACCTTGGG CGCGTTAGTC CGTGGCCATA TCGATGATGT TAGCTCGAAA
ATGAACATTC CGCGCAGCGA TTGGGTATCG CAAGTTGGCA TCACCGACCC ATTGCATCGC
ACCGGAGCAC TCATTTTCAC CATTTCGATT TTGGCAGCAA CCTATGCAAT TGTGCATAAT
CGCAGTTTGC ACCCGTGGAT TCATCGCACC GCTTGGATTG CCAGCGGCTT GGTATTGACC
CAAGTTGCCG CCGGAATTGG TCTAGCCTAT GGGGCATTAC CACCGCCGTT GCAAGCGATT
CACCTAATCG TTGGCTCGTT GCTAATTGGC TGTTTGATGA CGTTGGTATT GCTGGCATAT
CGCTTGCCTG TTAGCCCAAG CACAAGCAAA GAAGCGTTCA AACAAGTTGC CGAAGCCAGC
CACTAA
 
Protein sequence
MEQMRVPTDQ VRFSWRRLDR FQKWAMITTI ATYFLIFVGG IVRASGAGLG CPDWPKCFGY 
WIPPASADMI AQHGFDASQF NPTLMWIEYI NRLIGMLIGF FLLITTYLML RHYRKSKRVF
WSVLGALALT LFQGWLGGKV VHLELEGWIV TLHMILALVI VGLLLYATVC AFFPNGRPIA
NVPAERRTVA RWGQALVGFG LVQLTLGALV RGHIDDVSSK MNIPRSDWVS QVGITDPLHR
TGALIFTISI LAATYAIVHN RSLHPWIHRT AWIASGLVLT QVAAGIGLAY GALPPPLQAI
HLIVGSLLIG CLMTLVLLAY RLPVSPSTSK EAFKQVAEAS H