Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4248 |
Symbol | |
ID | 5736102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5420279 |
End bp | 5421517 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641281403 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001547008 |
Protein GI | 159900761 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.646884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCAA CTGTGCAACT GATCTTATTG CTGTTGGTGT TAATCGGTGT TGCTAAAATT GGGGGCGCAC TTAGTGCCGC GCTTGGCCAA CCAACCGTGT TGGGTAAGCT GTTGGCGGGC GTGCTGCTTG GCCCAAGTTT AATTAATGTC ATGCACTGGG AAACCTTTCA AAGCAGCGAT CTGAAATCGA CCATCCACTA CCTCTCGGAG CTTGGGGTCA TTTTCCTCAT GTTTATCGCA GGCCTGCGCA TCGAAGCCCA TGAGTTGCGC GAAGCTGGCA AGGCCGCAAC TTGGACAGCG ATTTTGGGTG TGATCATTCC ATTTTTTGGT GGGCTGCTCA GCGCGTTGGC TTTTGGCTAT GGCCTTATTC CAGCGATTTT TGTGGGCCTA TTGTTGACCG CAACCAGCGT TAGCATTTCG GCTCAAACCT TGGTTGAGTT GGGGCGGCTC AAAAGTCGAG TTGGTACAAC GTTGCTAGGC GCGGCGGTGC TCGACGATAT TATTGGGCTG CTGTTACTCT CAATTTTTAT GGCCACTCAA ACCAGCGATG GCAACTTCAT GACGATTGTT TGGACGATTG TACGCTTGGT GGGCTTTTTG GTGGTGGCTT GGTTCTTGGG CCAGCGCTTT TTGCCGCGCA TCCTTGAACG GGTCAAAAAA ATGCGCACCA ACGAGCCAGT GCTCACCTTT GCGGTGTTGG TGGTGCTTGG CTTAGCCTTC ACGGCTGAAA CGGTGGGGCA TTTGGCCGCA ATTACCGGGG CATTTATGGC CGGTATTCTC CTGAGCCATA CCGATGTGCG CGATGAAATT GACCGCTCAA TTTCGAGCTT TACCTATGCC GTACTTGTGC CAATTTTCTT TATTGGAATT GGATTGAACA CCGATTTGAG CAGCCTCAGC GGTGCAGCCA TCCCAATGGC CATTATGTTG TGTATCGTAG CGATTGGTAC CAAAATTGTG GGCTGTGGCC TAGGAGCCAA AATTGCTGGC CTCAACCAAC GTGAGGCAAT TCAGGTTGGC TGTGGCATGA TCTCGCGCGG CGAGGTCGGG TTAATTGTCG CCTCGCTGGG TGTCCAAAAT CAAATTGTTG ATACTAATGT ATTTTCATTG ACCGTAGCAG TAGTCTTGGT AACCACTCTC GTCACGCCAA TTCTGCTGAA ATGGTCATTC AAAACCGAGC CATTGCCAAG CCTCCACTTG GCGCTTGAGC CTGAAGATGA AGTGTTGGCA ATTGGCTAA
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Protein sequence | MSSTVQLILL LLVLIGVAKI GGALSAALGQ PTVLGKLLAG VLLGPSLINV MHWETFQSSD LKSTIHYLSE LGVIFLMFIA GLRIEAHELR EAGKAATWTA ILGVIIPFFG GLLSALAFGY GLIPAIFVGL LLTATSVSIS AQTLVELGRL KSRVGTTLLG AAVLDDIIGL LLLSIFMATQ TSDGNFMTIV WTIVRLVGFL VVAWFLGQRF LPRILERVKK MRTNEPVLTF AVLVVLGLAF TAETVGHLAA ITGAFMAGIL LSHTDVRDEI DRSISSFTYA VLVPIFFIGI GLNTDLSSLS GAAIPMAIML CIVAIGTKIV GCGLGAKIAG LNQREAIQVG CGMISRGEVG LIVASLGVQN QIVDTNVFSL TVAVVLVTTL VTPILLKWSF KTEPLPSLHL ALEPEDEVLA IG
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