| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4240 |
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| Symbol | |
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| ID | 5736094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5406080 |
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| End bp | 5409274 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641281395 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001547000 |
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| Protein GI | 159900753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGCTA ACCTGTATAG CTCAGATCAA CAACGCTCAC GCTTTATCTG GTTAATGGGC
ATTCAAGCGG TCTTGGTGGT TGTGTTGCTG ATCGCCTCAA CCCTCTTGAC GGTTGGCATG
AACCGTTTAC GCGATCGTGA TGAAACGTTG CTGAGCTATC GGGTGCGTTT AAATGACGTT
AATATTGCTC TGTTATCGTT GCACAACAAT TTGCGCGGCT ATACCAGCAC TGGCTCAGAT
ATTTTCTACG CGGAAATTCA AAAAGAACAG GCAGTTGTTA CCGAGGGTTT GCAATTTCTC
TTAGTCAACC CGCCCGACCC GAGCTTGCCC CAAGTCGCTG AGCAAGTCGA TCAATGGCTG
CTCAATACCT ATCAGCCAGT GCTGGATGCA GTGGCCAACC AAGAAATGCT GTTGGCCGAA
TTGACGCTTG AGCAAGGTCG CCCACAAATC GAGGCGGTAG TTAACACGAC AACCAGCTTG
CGCACTGAAT TGCGCCAGCG CTCGGAAGAT TATCGCAACC AAATTGATAC TTACAATTGG
ATTAAACTGG CCTCGATTGG TTTGCTCTCA GCATTAATTG TGGTTTCGAT GATTGTGACA
GTGCGCTTCT GGCGCACCCA ACAGCACTTA ATTCACGAAA TTGAAGATAA AGGCAGTCAA
CTGCTGCAAA GCAACCATGA ATTAAATTTC AATACCAATC AACTTTCAAT TATCAACAGT
ATTTTGGGCG TGCGGATCAA CGAGTCGCGG GTGTTGCGCG AAATCAGCGA TTATTTGGTC
AATAATCCTA CCCCCGCTGA GGCCTATAGC TTTGTGGCGC AAACTGTTGG TAATGTGCTG
AATACCTGGT GTAGCATTGC GCTGCGTTTG CCCCCGCCCC GCGAGGAATT TCTCGATGTG
GTGGCTTCAT ATCATTCGTT GCCCAGTCGC CAAGCCTACA TCGACCAAAT GGTGCAAACA
GTCCAATTTC GCATCGATAA TGGTCTGTAT TCGCCAGTCT TTACCCAGCA TGCTCCCTTG
GTTGAACTCT TCAATGTGCC CGTTGAGCAA CGTCACCCCA ACTATTTGAC CAACGAGGTT
CGCGAACACT TGGAGCCATT CACGCTCTAT TCGTATATCG CTGTGCCGAT TAAAATTCAG
GATGAAGCAG TTGGCCTGAT TTCGGCAGCC TCAGATTCGC CTGAACGGCT GTTTGACCAT
GATCAAACCT TGTTTGTGCG CCAAGTCGCT GATCGTTTGG CCGCTTGGCT TGAAAATATT
CAATTATTTT ATTTGCTCAA ACAACAGGCC AACGAGCTGC AAACGAGCTT CGATAGCCTC
GACGATATTG TAGTTTCCTA CGATAGCCGT GGTCATCAAA CGCGAATCAA CGAGGCTGGC
ACGCAGTTTT TTGCTGGTCG CCACTTTGAT TTTCTCTCCA ATAATTTGGT TTGGCGCACG
GCTAAGGGCA ATGTATTGGG CTTCGATGAG CATCCGATTC AGCAGGCGTT GGCTGGCACA
ACCGTGCGTG ATGTTGAAGT TTCGTTATCA CGCTCCGATG GTGTGCCGAT TATTCACGAA
GTCAGCGTTT CGCCGCTGCG ATCTGCCGAT GGTTCAATTG AAGGCATTGT GCTGGTGGCG
CGAGATTTGA GCGCTCGCAA GGAGCTTGAT CGGCTCAAAG AAGAACTTGT TGCCAATATG
AGCCACGAGT TGCGCACGCC GCTCACTGCC ATTTTGGGCT ATAGCGAATT GCTGCTCAAA
CGCCGCACCG AAGTGCTTAC GCCTTGGCAT ACCACCAAGA TTGAGGGGAT TCGCACTGGC
GGCCAGCGTT TGCTGAGCCT CGTCAACGAT CTGCTAGATA TTGCCAAGCT TGATGCTGGC
CGCATCGAGT TGCAACGCCA AACCACCATC ATTAATAGCT TGTTGCAAGA GCAAGTGGCG
ATTTTGCAGC CGATGCTTCG CGAGAAACAG CAAACCCTCA CCTTGCAACT GGGCCAGCAC
ATCCCCTTGC TCATGATCGA TCCTGAGCGG ATTGGCCAAG CAGTGACCAA TTTGTTGAGT
AACGCCATTA AATTTACGCC AGAGCAAGGT ACAATCACCT TAGCCTCAAC CGCCTTGAAC
ATTGATGAGC ATGGCCAAAT TGACTGGCTG GATCAAGTGT TGGCGACCGA AGTGCCGCCG
ATGTTGGCAG GCCAATATGT CTTGATTCAG GTCAGCGATA GTGGGGTGGG CGTGCCAGCC
GAAGCGCTCG TAAAATTGTG GGATCGTTTT TATCAAGTTG AGGGTGGCTC GACGCGCCGT
TTTGGGGGCA CAGGCTTAGG TTTATCGATC GTTCAGCAAT TAGTTGAATT ACATGGTGGA
CGGACATGGG CGACTAGCGC AGGCGAAAAT CAAGGCAGCA GCTTCACAAT TATGTTGCCA
GTCAGCCGCG GTGCCCAATT TGTGAGCCTC ACTCAAGGCT TACGGCGTTC GATTTTGGTG
ATTGAAAACG ATCACCAAAC GGCCCAATAT TTGGAAGAAC AATTGCAAGC GGCTGGTTTT
GAAGTGATTG TGGCGACTGA TCATCATAGT GCCTTGACTT GGGCCAAAGA TCATTCACCA
GCGGCAATCA CCCTCGATTT GCTCATGCCC AATAGCGAAA GCTGGGAAAC CTTGGCAGCC
TTGCGCGAAA TTGACCATTT AGCGCAAGTT CCCGTCTTGA TCGCAAGCGA TGCTTCGGTA
TACAATGAGC TACCAGGGGT TGGTGTCTCC ACATATGTAG TCAAGCCAAT TGATAGCCAA
ATTCTGATTC GGATTATTCG TCAACTGATT GGGGCTCAAG GCCAAACAGG GTTTATCTTG
GTGGTTGATG ATGATTATGA TATGGCCGAA CTGCTGTGTG CTACTTTGCA AGAGCATGGC
TACGTTACCC AAGCCTCATA CGATGGGGCG GCGGCGCTCG ATCTGATTCA ACAGGGCAAT
TATCCCCAAC TAATTTTGCT TGATTTGATG ATGCCAGAGG TTGACGGCTT TCAGCTACTC
GAAAAACTGC GGGCAAATCC TGAAACTCGT AATATTCCCG TGATCATTGT GACTGCCCGT
GACTTAACCA ATGAAGAAAT TCGCCAATTG CGCCAAGCTG CGCAAGCCAT TCAGACCAAA
CATACCCTCA GTATGCGTAA GCTGGTTGCT GAAGTCCAAC GGTTTGCCCC GTTGAAGGAA
TCGGATACCC CATGA
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| Protein sequence | MLANLYSSDQ QRSRFIWLMG IQAVLVVVLL IASTLLTVGM NRLRDRDETL LSYRVRLNDV
NIALLSLHNN LRGYTSTGSD IFYAEIQKEQ AVVTEGLQFL LVNPPDPSLP QVAEQVDQWL
LNTYQPVLDA VANQEMLLAE LTLEQGRPQI EAVVNTTTSL RTELRQRSED YRNQIDTYNW
IKLASIGLLS ALIVVSMIVT VRFWRTQQHL IHEIEDKGSQ LLQSNHELNF NTNQLSIINS
ILGVRINESR VLREISDYLV NNPTPAEAYS FVAQTVGNVL NTWCSIALRL PPPREEFLDV
VASYHSLPSR QAYIDQMVQT VQFRIDNGLY SPVFTQHAPL VELFNVPVEQ RHPNYLTNEV
REHLEPFTLY SYIAVPIKIQ DEAVGLISAA SDSPERLFDH DQTLFVRQVA DRLAAWLENI
QLFYLLKQQA NELQTSFDSL DDIVVSYDSR GHQTRINEAG TQFFAGRHFD FLSNNLVWRT
AKGNVLGFDE HPIQQALAGT TVRDVEVSLS RSDGVPIIHE VSVSPLRSAD GSIEGIVLVA
RDLSARKELD RLKEELVANM SHELRTPLTA ILGYSELLLK RRTEVLTPWH TTKIEGIRTG
GQRLLSLVND LLDIAKLDAG RIELQRQTTI INSLLQEQVA ILQPMLREKQ QTLTLQLGQH
IPLLMIDPER IGQAVTNLLS NAIKFTPEQG TITLASTALN IDEHGQIDWL DQVLATEVPP
MLAGQYVLIQ VSDSGVGVPA EALVKLWDRF YQVEGGSTRR FGGTGLGLSI VQQLVELHGG
RTWATSAGEN QGSSFTIMLP VSRGAQFVSL TQGLRRSILV IENDHQTAQY LEEQLQAAGF
EVIVATDHHS ALTWAKDHSP AAITLDLLMP NSESWETLAA LREIDHLAQV PVLIASDASV
YNELPGVGVS TYVVKPIDSQ ILIRIIRQLI GAQGQTGFIL VVDDDYDMAE LLCATLQEHG
YVTQASYDGA AALDLIQQGN YPQLILLDLM MPEVDGFQLL EKLRANPETR NIPVIIVTAR
DLTNEEIRQL RQAAQAIQTK HTLSMRKLVA EVQRFAPLKE SDTP
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