Gene Haur_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4234 
Symbol 
ID5736088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5396099 
End bp5398249 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content48% 
IMG OID641281389 
Producthypothetical protein 
Protein accessionYP_001546994 
Protein GI159900747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGGA AACGGATCGT CGGAAACAGA ATCGGATTTT ATTTAATCTT AATTGGTATC 
CTGCTCAATT TGGGCACAGT CAAAGCCCAA CAGCCCCAAT CTCAGCCAAA GCGGCTGCTC
AGCTCAGCGA CAGACAGGGC TTTTGAACCA ACAACCATCC AATCCTCGCC CTTAACCTTA
ACCAACAGCA GCGTGATTAG TGGCACCTGG GATACGAGCT TTGGCAATAG TTTAGCGACC
GCTGGCACGA TCACCAAGTT GCATCTTGAT GCCAATAATC GTTTGTATGT CGCTGGTAAA
TTCAATTACC TCAATGGGCA ATTGTTTAAT GGGCTAGCCG CATGGAATGG TACAACTTGG
CAAGGCTATG GCTTGCAAGC CAATGATGTG GATACGATCA ATGCCCTCGA TAGCTACCAA
AACCAATTGG TGGTGGCTGG GCGTTTTCGC CAATTGGCGA ACCAAACCAC GAATGGCCTT
GCCCGTTGGG ATGGTAGCCA ATTTCAAGCC TTTGGCACTG GCGTTAGTGG CATCAACGAT
TCATATCGCA ACAATATTAT TTCGCAGGTC TATGATATTG AAGTCCTGAG TGATACGCTG
TATCTCGGTG GCAACTTTGA TACATTTAAT GGCCTCGATG CCCACGGCAC AGCCTACTGG
CGACCGACCG GCTTTGGCGA GTTTGGCGAT TTTAATGGCG TAATCAGCGA TCTCGATGCA
ATTCCCAATA CGCTTTTTGC TGGTGGCAGT GTAAGCCGCG TCAATCAAAC CTCAATTCAA
GGTTTAGGCT TATGGAATGG CACAACCTGG CAAAACTCCA GCTTGCCAGG CTCAAATGCC
GCCCGTGATC AAATAGGGCG AATTGGGACG ACGCTCTATA CCTGGGCCAA TAACTATGAT
CCGCGACAAA CCATGATGTA TCGCTGGAAT GCTAATCAGT GGCAAGCGTT TGGCAGCTGG
ATCGATGAAT TTGTGCTTGG TGTGGCGCAA AGCAACGATT TATATGCCTA TACTATCAGC
GATCTATGGC GCTTAGTTGG CAACCAATGG CAATTGGTCA ATCTGCCAAT GACGATCAAC
TCTATTAATA CAGTTGTTGG CAATGACAAT GGGTTGTATC TCGCTGGTAA TTTTGAAGTT
GATGGCAACG CCGTGCAATT GGTGCATTGG AATGGTACAA CGCTCACGCC ACTTGCCAGC
ACCAGCGTTT ATCCACGGCT TGATGAAATA ACCGGCGTTC AAGGTCTGCC AATTATCAAA
CCAAATTGGC CGAATGTGCT CAAGCAGTGG GATGGTCAAA CCTGGCAAAC AAGCTACGCA
TTACAGGGGA TGGCTAGCCT TTTCGCCACC AGTGATGATC GTGCCTATTT GGCTTACCCT
TATCCATATC AAACCGCTGG TTCATTGAGC AGTTCGCTGT GGCAATTTGA TTCGACTGGC
GCGTTGACTG CTCCCTTGCA ATTGATTGGT CAGGCAACCA CCTGGACGCT TTCAGGAACC
GAGCTTTTGG CTAATGGCAT AACGATGATT AACAGCCAAC CAATCAGTGG GGCCGTGGCG
CTGAATGGCA CTGAATGGCG TGAATTAGGG CTAAACACCA ATTTTCGCAA GATCTATTAT
GCCAATAATC GTATCTATGC GCTGATGATC ACCCAAAACC ATGATTGGTG GGAGATTGAT
ATTGACACTT GGAATGGCAC TGCTTGGGTT GATTTTACTG GGTTGTTTGT ACAAAGCAAT
GGCTCGATTC CACAATTTGT AACCTGGCGC AATCAGCTGT ATTTTACCAA CGGCAATCAG
TTGCATCGGC TCGAAAATAC TGGCAATAGC ATGGTATTTG AGTTTGATGG TGCGCCATTG
CAACTTGCCA ACATCAACGA TCGCTATTTA TATGTTGGCG GGGCATTTAG CAAAGTCGGT
GAGCAACAGC TTGGTAGCAT TGTGCGCTGG AATGGCAATA GCTGGCAAGC TCCAAGCCAA
ACGCCCAACG GCACAGTTGA ACACATGGCA ATTACCGAAA ACTATCTCTA TTTGAGTGGT
AATTTTACCC ATATTGGCGC AAACCCAAGT TTAGGTGTGG CCAGCTTTCA GCTTGCCGCT
GAACCTGAAC CACTACCCTA TCAATTGTTC ATTCCCCAAG TTGTCAAATA A
 
Protein sequence
MARKRIVGNR IGFYLILIGI LLNLGTVKAQ QPQSQPKRLL SSATDRAFEP TTIQSSPLTL 
TNSSVISGTW DTSFGNSLAT AGTITKLHLD ANNRLYVAGK FNYLNGQLFN GLAAWNGTTW
QGYGLQANDV DTINALDSYQ NQLVVAGRFR QLANQTTNGL ARWDGSQFQA FGTGVSGIND
SYRNNIISQV YDIEVLSDTL YLGGNFDTFN GLDAHGTAYW RPTGFGEFGD FNGVISDLDA
IPNTLFAGGS VSRVNQTSIQ GLGLWNGTTW QNSSLPGSNA ARDQIGRIGT TLYTWANNYD
PRQTMMYRWN ANQWQAFGSW IDEFVLGVAQ SNDLYAYTIS DLWRLVGNQW QLVNLPMTIN
SINTVVGNDN GLYLAGNFEV DGNAVQLVHW NGTTLTPLAS TSVYPRLDEI TGVQGLPIIK
PNWPNVLKQW DGQTWQTSYA LQGMASLFAT SDDRAYLAYP YPYQTAGSLS SSLWQFDSTG
ALTAPLQLIG QATTWTLSGT ELLANGITMI NSQPISGAVA LNGTEWRELG LNTNFRKIYY
ANNRIYALMI TQNHDWWEID IDTWNGTAWV DFTGLFVQSN GSIPQFVTWR NQLYFTNGNQ
LHRLENTGNS MVFEFDGAPL QLANINDRYL YVGGAFSKVG EQQLGSIVRW NGNSWQAPSQ
TPNGTVEHMA ITENYLYLSG NFTHIGANPS LGVASFQLAA EPEPLPYQLF IPQVVK