| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4225 |
|---|
| Symbol | |
|---|
| ID | 5736079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5385021 |
|---|
| End bp | 5387225 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641281380 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001546985 |
|---|
| Protein GI | 159900738 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0726611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC GATACACGCT GCATACCTGC ATCATTTTGG CGGTTGCTTT GGGCCTGCGC
CTCGCCACAT GGTGGCTTTT GCCCTATAAC GATTGGATTA GTGACGAAGG CGAATATTGG
GGTGCTGCTA TCTGGCTAGC GCAAGGCCGC GAATTTCAGT TTTTCGATAG CTGGATCTGG
ACACGCCCGC CGCTGTATAT TAGTTTTTTG GCGGCGCATA TCAAGCTTTT TGGCAATAGC
GCGTTGTGGG CTCCCCGCCT GAGCCAAGCC TTGATCAGCG TTTTGAGCGT TTGGCTAACC
ATGCGGATTG CCAAGCGGCT CACTCCAACT GAACACCAAG CACGGGTTAG CTTAATTGCT
GGCTGGCTGA TGGCGCTGGG CTATTCATTT GCTGCATTCA GCTATTTTAT GCTTTCAGAA
ACGTTGTTTT TGAGCATCTT CTTGGCGGCG AATTTATTGT TGTTGCGCTG GGCTAGCACC
CGCCATTGGC GCGATTTGCT CTTGGCTGGG GTAGGCTTTG GCTTTGCTGC CCTGACCCGA
GCGATCATTT TAACATGGCT GCCGTTGCCC GCCTTGTGGA TTGCTTGGCA AATTTGGCGC
ACTCAGCGCC CACGCTGGCA AGCCATGATT AAACCAGTGC TTGGCTTTAC GCTCAGCGTT
TGTGTAATTG TCTTGCCGTG GACAGCCTTT GCAACCAATC GTTGGAGCAA CGGCGATGGC
TTAATTTTGG TCGATACGAC TGGTGGGTAT AATTTTGCCC TCGGTGCGCA AATTGCCACG
CCTGATGGCC GTAATGGCAC CCGCCTAGCC GAGATTTTGT GTGGTGGCAA TGGCTTAGTT
TGCCAAGGCT CGCAGGCAGC ACGGCAAAAT CAAGCGTATG CCCAAGGGTT TGAGTGGCTA
GGCGAAAATC CACAGCGCTT TATCAGCAAA ACGGCGCTTG AATTATTAGA TATTTTACAA
GTGCGCTTTG ATAGCGCTGA ACATTTGACC GATGGCTATG TTGATGGCCG CGTGCCAGTG
CCCCATCTCT TGGGCTTGTT GCTCGACGAC ACGCTGTATG TAGTGCTTGT AGGCTTGGCG
GTGCTTGGGT TTTGGCGCAA GCAAGCGGTT GCTGGCAAAG GCTTGGTGCT TGGTTGGTTG
GGCTATAACA TTATTGTTGG CTCGTTGATT TTTGCAATTG CCCGTTTTCG TCAACCGCTG
ATTCCCTTCG TGATCATCTA TGCCGCCTTG GCAATCGTGC AGTGGTCGCA AGCTTGGGCC
AGCAGCCGTC AGCAGCGTTA TGCTTGGGCT AGTGCTTGCT TGTTGTGGCT GATTGTGTTG
CCATCGTATC TGTATTTACC AGAATCGGTC GGGGTACGCA GCGTTTGGCA AGATGTGCGT
TTGGGCTTTG CTGGCGTGCA ACAAGCCAAC CAATGCCAGG CAATTCGTGA GCTATTGCAA
GCTGGCGATG TAGTGGCAGC TCGCCAACTG CACGACCGCA TTGATGCCGA GGGTCGCAGC
GAAAATACTA GCGTTAGTGG CTATACTGGG CGGCGCTGCT TGGCCTTGAT CAACGGCCAA
TTGCTCGAAG CCGAAGCTAA ACCAGAGCAA GCCTTGGCCT TCTACCAACA GGCTAATCCC
AAAAATAATC CGGTGCAATC GGCCCGCATT TTGATGCTCG AAGGCAATTT GCTGCAACGC
CAAGGCCAAC TTAGCGCAGC AGTCGCCCGT TTTAATTTCC GCGATGTCGA AATTATTAAT
GATCTGGCTT GGGCGTGGGA TTATTTGACC GTTGTGCCAA CCACCACCAT CGATCTTGGC
TCTGGCTTGG ATTATGGCTA TGTGCGCGGA TTTTATCAGA GCGAGCATAA TCAACCAGAT
TTTCGCTGGA GCAGCCAAGC CTCGGCTTTG CGTTTACCGC AAGCGGCGAC TGGTCAAGCG
CAAACCCTGC GCTTACATCT GAATGGCTTT ACCAACGATT GGCAACCAAC CCGCATCAGC
ATTAGCCTCA ATGGCCAATT GATCGATAGC TATCAACTCA AACCCGATTG GCACTGGCTG
GAAATTGCTT TACCTGCCCA ACCGCAAGGC AGCGATTTGC TGATTGAATT TACTAGTAGC
ACCTTTGTCA GCGGCCCCGA AGATTTAGCA ACGCGGGTCA GTTCGCGAGC CTCCGACCCA
TTGCGCTTAT TGGGCTTTCA GCTTGATCGG GTCGAAATTA AATAG
|
|---|
| Protein sequence | MMKRYTLHTC IILAVALGLR LATWWLLPYN DWISDEGEYW GAAIWLAQGR EFQFFDSWIW
TRPPLYISFL AAHIKLFGNS ALWAPRLSQA LISVLSVWLT MRIAKRLTPT EHQARVSLIA
GWLMALGYSF AAFSYFMLSE TLFLSIFLAA NLLLLRWAST RHWRDLLLAG VGFGFAALTR
AIILTWLPLP ALWIAWQIWR TQRPRWQAMI KPVLGFTLSV CVIVLPWTAF ATNRWSNGDG
LILVDTTGGY NFALGAQIAT PDGRNGTRLA EILCGGNGLV CQGSQAARQN QAYAQGFEWL
GENPQRFISK TALELLDILQ VRFDSAEHLT DGYVDGRVPV PHLLGLLLDD TLYVVLVGLA
VLGFWRKQAV AGKGLVLGWL GYNIIVGSLI FAIARFRQPL IPFVIIYAAL AIVQWSQAWA
SSRQQRYAWA SACLLWLIVL PSYLYLPESV GVRSVWQDVR LGFAGVQQAN QCQAIRELLQ
AGDVVAARQL HDRIDAEGRS ENTSVSGYTG RRCLALINGQ LLEAEAKPEQ ALAFYQQANP
KNNPVQSARI LMLEGNLLQR QGQLSAAVAR FNFRDVEIIN DLAWAWDYLT VVPTTTIDLG
SGLDYGYVRG FYQSEHNQPD FRWSSQASAL RLPQAATGQA QTLRLHLNGF TNDWQPTRIS
ISLNGQLIDS YQLKPDWHWL EIALPAQPQG SDLLIEFTSS TFVSGPEDLA TRVSSRASDP
LRLLGFQLDR VEIK
|
|---|
| |