Gene Haur_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4220 
Symbol 
ID5736074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5377415 
End bp5377948 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID641281375 
ProductHNH endonuclease 
Protein accessionYP_001546980 
Protein GI159900733 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTC CCGTACTCGT CCTCAACCAT AATTACGAGC CACTCAATAT CTGCTCTGCA 
CGTCGTGCCT TGATGCTTGT GTTGGGTGGT AAAGCCGAAG TGTTGGAACA CAACCACGCC
GTGTTGCACA CGACCAACGA CACCATTGCT TGTCCGTCGG TCATCCGACT GGGCCATATG
ATTCGTCGTC CCTTGCCCAA TGTTAAGCTT TCTCGCCGTG AAATTTTCCG TCGCGATCAC
TACACCTGCC AATATTGTAA TCGGAGCAGT GCTGATCTCA CGCTTGACCA TGTGTTGCCG
CGCCATCGCG GTGGTGCCCA TAGCTGGGAA AATCTGGTAA GCGCCTGCCG AACGTGTAAT
CATCGCAAAG GTGGGCGAAC TCCCGAGGAG GCACGAATGC GCTTAATTCG GCCACCCTTT
CGCCCGTTTG CTAGCCCATA CTATTTAATC GAACGCCGAA TGCATGGGCT TGGTCTTGAA
GAATGGCGTA AATTTCTGCC TGCGTCCTTT CAGACTGTGG AGGACGATCA ATAA
 
Protein sequence
MNSPVLVLNH NYEPLNICSA RRALMLVLGG KAEVLEHNHA VLHTTNDTIA CPSVIRLGHM 
IRRPLPNVKL SRREIFRRDH YTCQYCNRSS ADLTLDHVLP RHRGGAHSWE NLVSACRTCN
HRKGGRTPEE ARMRLIRPPF RPFASPYYLI ERRMHGLGLE EWRKFLPASF QTVEDDQ