| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4216 |
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| Symbol | |
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| ID | 5736070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5371329 |
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| End bp | 5373482 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641281371 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001546976 |
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| Protein GI | 159900729 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC GACGATCCGT GCTACGGATC TCCTCGCGGC AACGAACTCA CTTTCAAGCC
AATCCTTGGC GAATTCGGCG CATGATCACT GAGTTGCATG CGCTACACGA GATTCGCCAC
GCGATTAACC AGGCCTTGGA ATTGGATACG GTGCTTGAGG AGATTTATAG TCAAACATCG
CGATTAATGG ATACCCGCCA ATTTTACTTG GCGTTATACT CGCCTGAACA AGAATTGATC
GAGTTTGCCT TGGCAGTTGA AAATGGCCAG CGCGTCTCTT GGCCCGCCCG CCCCTATGCC
AATGGTTTAA CCGAATGGAT TTTGCAACAT CGCCGCCCCC TGCGGATCAA CGCCCATAAC
CTTGATCCTG CGGTTGCACC GATTATTGTT GGGCAGCCTG TCCAATCATT TTTAGGGGTT
CCAATTGTGC TTGGTGAGCA GGTTCTTGGG GTTATGAGTG TGCAATCGGT CGAACGAGCC
GAGGCCTATT CTGCCCACGA TGAACAAATT TTGACCATGA TCGCCGATCA GGCCGCTGTC
GCGATTGCCC ATGCCAAGCG CTTTGCCGCC GTTGATCAAC AGTTGCAAGC CCGCGTTGCT
CAACTTGAAA CCCTCGAAGC AACCATCCGC GATTTAAATG AAACCCTCGA TGTTGATACA
ATTCTGAATC GCTTACTTGA CCGTATCCAG CCGATTATGC ATGCTGATGC TGGGATGGTT
TGTTTGCTTG ATACCGAACA GCAACGGATG TTTATCCGCG CAATTCAGGG CTATCCAGCT
GAAGTTCGGC GTTTTCAATT TGAAGGTTGG CCAATTGATC GTGGCATTGC GGGCTTAGTT
GCACGTACCG GTCAACCTGA TTGGACTGCT GATATTCGTA ATTCGAGTTA CTATGTTAAT
TCGCGGCCAA CTACATTGAG CCAAATGACT GTGCCAATTG TGCATAGTGG CAAAGTTCTA
GGTGTAATGA TTCTCGAAAG TGATCGAGTT GGCACATTTA ATGATGATAC GACGCGCTTT
GTCAGCCAAA TTGCTGATCA TGCGGCGCTT TCAATTCATA ATGCGCGTAT TCATCAGCAA
GCAGTTGAAC AACAAGCGTT GTTGGCTCAA CGCTCACAAC AACTCAACGA AGTGCTGCGT
ATCAGCCAAG CATTAAGCGC CAACCTTAAT TTAAATGATC TGCTGCCAGA AATTGTTCGA
GCAATTCAAG CAAGTTTGGG TTTCAATATT GCCTTGCTGA GTTTAGTTGA TCAAGAACGA
CCAACCTTTA TGCGTCGCCG TGCCGTGGTT GGTGTGCCTG ATGAACGCTG GTTTGAATTA
CGTGATCAAT TAGTGCCAAT TGAATGGTAT CGCAGCGTAA TGCGCGAAGA ATTTCGGATT
AGCCGCTCGT ATTATATTCC GCATAGCCAT ACCAGCTATA CCGCCATTTG GGGCAATAAC
AGTGATACGT ATCGACCTGA TTTAGGTGAG CGTCGTCCAC ATGAATGGCA TCAAGATGAT
GCCTTGTTCG TGCCATTGTA CGATTCTGAT AATAATTTAA TTAGTATTCT CTCAGTTGAT
GATCCACGTG ATCGGCGGAA ACCATCGTTT GAATCGGTGC AGGTACTAGA AATTTTTGCC
ACTCAAGCAG CAATCGCGAT TGAAAACGCC CATTTATATA CAATTACCCA ACAATTAGCC
ATCACCGATG GCTTAACTGG CTTGTTCAAT CAACGCCATT TTATGACGAT GCTTGATCGT
GAAGTGGCCT TGGCCTATCG CTATAATTAT CCATTATCGT TATTAGCTTT GGATATTGAT
TATTTCAAGC AATATAATGA TAACTATGGC CACTTGGTTG GCAATGTGCT GCTGCGCGAT
TTTGCCCGGC TCATTTGCGA AAATGTACGC GATGTTGATA TTGTTTCGCG CAACGGTGGC
GAAGAATTTA CAATCATTTT GCCCAAAACT GATCAAGCAG GTGCAGTGTT GTTAGCCGAA
CGGCTGCGAG TTCGCACTGC CGAACATCTT TTTGGTCAAG GCCATATTAC GGTTAGCGTC
GGCGTTGCCA CCCTCAACAA CAATTGGGAT GCCCACACGT TGCACGATCA AGCTGATCAA
GCGCTTTATC GCGCCAAAAA TTCTGGGCGT AATCTGGTTA TCAGCGTCCC ATAA
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| Protein sequence | MTKRRSVLRI SSRQRTHFQA NPWRIRRMIT ELHALHEIRH AINQALELDT VLEEIYSQTS
RLMDTRQFYL ALYSPEQELI EFALAVENGQ RVSWPARPYA NGLTEWILQH RRPLRINAHN
LDPAVAPIIV GQPVQSFLGV PIVLGEQVLG VMSVQSVERA EAYSAHDEQI LTMIADQAAV
AIAHAKRFAA VDQQLQARVA QLETLEATIR DLNETLDVDT ILNRLLDRIQ PIMHADAGMV
CLLDTEQQRM FIRAIQGYPA EVRRFQFEGW PIDRGIAGLV ARTGQPDWTA DIRNSSYYVN
SRPTTLSQMT VPIVHSGKVL GVMILESDRV GTFNDDTTRF VSQIADHAAL SIHNARIHQQ
AVEQQALLAQ RSQQLNEVLR ISQALSANLN LNDLLPEIVR AIQASLGFNI ALLSLVDQER
PTFMRRRAVV GVPDERWFEL RDQLVPIEWY RSVMREEFRI SRSYYIPHSH TSYTAIWGNN
SDTYRPDLGE RRPHEWHQDD ALFVPLYDSD NNLISILSVD DPRDRRKPSF ESVQVLEIFA
TQAAIAIENA HLYTITQQLA ITDGLTGLFN QRHFMTMLDR EVALAYRYNY PLSLLALDID
YFKQYNDNYG HLVGNVLLRD FARLICENVR DVDIVSRNGG EEFTIILPKT DQAGAVLLAE
RLRVRTAEHL FGQGHITVSV GVATLNNNWD AHTLHDQADQ ALYRAKNSGR NLVISVP
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