Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4190 |
Symbol | |
ID | 5736052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5346268 |
End bp | 5347065 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641281345 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001546950 |
Protein GI | 159900703 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAAGC GTTTGTTGGT CGTGGCGGTT GGAGTGAGTG TCTATGCCAA TCCAGCGATT CCACCGTTGC CAACTTGCCG TGATGATGCC CAAGTTTTTT TGAATGCGCT ACGACCCTTG AGTACCCAGC CCTTGCTTGA GCGAGTTTTG TTTGATGATC AAGCGACCAA AGCCAATATT CAGGTGACGC TGGAATGGTT GGCAGGCGAG GTCGCCGCTG ATGATTTGGC GATTGTCTAT TATTCAGGCC ATGGAGCCAG CTTCGACGAC GATAATGGTG ACGAGAGCGA TGGCAAAGAG GAGTTTTTAT GTCCATATGA ATGTGGTATG GAGCAAGGCG TAGGCAGTTT TGTGCGCGAT GATGAACTGC GAGTTTGGCT AACTCCAATC CGTGAAAAAG CCCCATTGTT GGTGGTACTC GACGCTTGCC ATAGTGGCAC AGGTGCAATG GCTCCAGCGG GCTTGATCGC CAAAGAATTA CCAGCAGGCT TGGTTAAGCA AATTATTGGC AATGCCACGA TTCCGGCTGG CGCTGGTGGC GATCCAATTC CGGCCAATCA AGTGCTTTTG GCTGGCTGCC AAGATAGCGA ACAATCCTAC ATTTTGCCTG GCGAGCCAAA CTCGTTGTTC ACGGCCAAGT TGGTTGAGCA AATCGCCGCT GGCCAAACTG CTGATATTCA AAGCCTATTT GAGGCAACCT ACAATGCCGT GCTCGATGCT AGCGATGTGG CGGGCATTCA GCAAACCCCG AAGATTAGTA ATGGGCTGAG TGCGCCGCTT GCGCTACGAT CAGCCTAA
|
Protein sequence | MPKRLLVVAV GVSVYANPAI PPLPTCRDDA QVFLNALRPL STQPLLERVL FDDQATKANI QVTLEWLAGE VAADDLAIVY YSGHGASFDD DNGDESDGKE EFLCPYECGM EQGVGSFVRD DELRVWLTPI REKAPLLVVL DACHSGTGAM APAGLIAKEL PAGLVKQIIG NATIPAGAGG DPIPANQVLL AGCQDSEQSY ILPGEPNSLF TAKLVEQIAA GQTADIQSLF EATYNAVLDA SDVAGIQQTP KISNGLSAPL ALRSA
|
| |