Gene Haur_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4179 
Symbol 
ID5736041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp5329582 
End bp5330607 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID641281334 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001546939 
Protein GI159900692 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0656088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTG TAATGAAGGC CCACGCTGAC CTCGCCGACC GTGACGCTGT ATTGGCTCGC 
TTAGCCGAAA ATAAGCTCAA AGGCCATTTA TCGGAAGGCG AGGAACGAAT TGTGATTGGA 
GTTGTTGGTG CGAAAATTCC AGCGGGCTTG GAAGAACAAT TGCAATCGAT GAGCGGCGTG 
CAAACAACCT TGCGAATTAC GCGCCCCTAT AAATTAGCTG GCCGCGAGTT TCAACAACAC 
AATACCGTCA TTCGGATTGG CGATTTGGAA ATTGGCGGCG GTACTCCAGT CGTGATGGCT 
GGGCCATGTT CGGTCGAAAG TGCTGAGCAA TTATTAAGTA CAGCACACGC GGTCAAAGCA 
GCCGGAGCCA ATATCCTCCG TGGTGGCGCA TTCAAGCCAC GCACTTCACC CTACGCTTTC 
CGTGGTTTGG GCGAAGAAGG CCTGAAAATT TTGGCCCAAG CTCGCGAAGA AACAGGTTTA 
CCAATCATCA CCGAAGCCCT GAATACCCGT GATGTTGAAT TAGTCGCCCG CTACACTGAT 
ATCATCCAAC TTGGCGCTCG CAATATGCAA AATTTCGCCC TCTTGGAAGA AGCAGGCCAA 
ACGGGTAAGC CGATCATGGT CAAGCGTGGC CCTTCAGCAA CAGTCGAAGA ATGGTTGTTG 
GCGGCTGAAT ATATTCTCGC GACTGGTAAT CGCAACGTTA TTTTGTGCGA ACGCGGTATT 
CGCACCTACG AAACTGCCAC CCGTAACACC CTCGATTTGA ATGCTGTGGC AGTTGCCAAG 
CGTCGGACTC ACTTGCCGGT GATTGCCGAC CCCAGCCATG GCACTGGCAA ATGGTACTTG 
GTGCAGCCAA TGGCCTTGGC CGGCTTGGCC GCTGGCGCTG ATGGTCTGAT GATCGAAGTT 
CACCACGATC CCGACCGTGC TTCTTCCGAT GGCCCTCAAT CACTCAACCA CCACAATTTT 
GCCCAATTGA TGCAACAAGT TCGTCGCCTG ATCGCAGCTT TGGAGCCAGA ATTAGCAGTT 
GCCTAG
 
Protein sequence
MIVVMKAHAD LADRDAVLAR LAENKLKGHL SEGEERIVIG VVGAKIPAGL EEQLQSMSGV 
QTTLRITRPY KLAGREFQQH NTVIRIGDLE IGGGTPVVMA GPCSVESAEQ LLSTAHAVKA 
AGANILRGGA FKPRTSPYAF RGLGEEGLKI LAQAREETGL PIITEALNTR DVELVARYTD 
IIQLGARNMQ NFALLEEAGQ TGKPIMVKRG PSATVEEWLL AAEYILATGN RNVILCERGI 
RTYETATRNT LDLNAVAVAK RRTHLPVIAD PSHGTGKWYL VQPMALAGLA AGADGLMIEV 
HHDPDRASSD GPQSLNHHNF AQLMQQVRRL IAALEPELAV A