Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4175 |
Symbol | |
ID | 5736036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5323043 |
End bp | 5325121 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641281329 |
Product | putative serine protein kinase, PrkA |
Protein accession | YP_001546935 |
Protein GI | 159900688 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2766] Putative Ser protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.170003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTC CCTCCGGCTC GCAACTGATG TCATTGCTGA GTACCTTACA AGATCAGCAA AACTATCAGA ATCTCAATTG GGCTGGCTCT TTCCAGGATT ATTTGGACAT CGTGGCCAAT AATCCCAAGG TCACCCGCAA TGCCTTCCAA CGGATCTACG ACATGATTAT GTCGTATGGC TTGGAAGAGT TCATCGATGC CAAGAAGAAG TTAATTCGTT ATAACTTCTT TACCACCAAC GAATTTGACG AGCAAGATGC CATCTTTGGC TTGGAAATCC CATTAATGCG CTTGGTTAAT TTCTTCAAGG CTGCGGCTCA CGGCTATGGC ACAGAAAAAC GGGTGCTGTT GCTGCATGGT CCGGTTGGCT CAGCCAAATC AACCATCGCC CGCCGACTGA AACGTGGTCT CGAACGCTAC TCGCGCAGTG AGGAAGGTGC GCTGTATACA TTCGATTGGT TTTTAGGTGA TATCGAAGAT CTCGACGCTG GTAAAGTCAA GGATGCTGAT TGGGACCCCT GCCCAATGCA CGAAGATCCG CTGCACTTGA TTCCGATGGA AATGCGCGAG GCATTTTTAA ACGAATTCAA TGCCAACCTC GAACCAGACG ATCATATTAC AATTACTGGT GATCTTGATC CTTCTTGTCG CTATAATTTC CGCGATCTGA TGCGTCGTTA CAATGGCGAT TTTGCCAAAG TGCTGCGCCA TGTCCGTGTA CGTCGCTTCG TCTTCTCTGA ACAAGATCGC GTCGGTATCG GCACATTTCA ACCAAAAGAT GAAAAGAATC AAGATAGCAC TGAATTAACT GGCGATATTA ATTATCGTAA AATTGCTATT TATGGTTCTG ATAGCGATCC ACGAGCATTT AGCTTCGATG GTGAATTTAA TATTGCTAAT CGTGGCATTA TCGAATTTGT CGAAATGCTT AAGCTCGATA CAGCATTTTT ATACGATTTG CTTGGTGCTT CACAAGAACA TCGGATTAAA TCCAAGAAGT TCGCACAAAC TCACATCGAT GAAGTTATCG TCGGGCATAC AAATGAACCA GAATTCCGTA AGCTTGAAAA TAATGAGTTT ATGGAAGCAT TAAAGGATCG TACTGTACGA ATTGATATTC CATACATTAC GCGATTGCGT GATGAAATTC GAATTTACGA AAAGGATTTC AATTCAGAGA ATGTACGGGT ACATATCGCG CCGCATACCA TCGAAGTTGC CGCAATGTGG GCAATTTTAA CCCGACTTGA AGAACCAAAA CGCGCTAATT TGACGTTATT GCAAAAGATG AAGCTCTACA ATGGAAAATC ATTGCCTGGC TTCACTGAAG ATAATATCAA AGAATTGCGC AAAGAATCAC GGCGTGAAGG TATGGAAGGC ATCTCTCCAC GCTATATCCA AGACAAAATT AGCAATGCCT TGGTCAATTA CCAAAGCGAT GGCGGGATCA ATCCATTTAT GGTGATGAAT GAGCTAGAAA GCGGCCTCAA AACCCACTCA CTCATTACTA ATGAAGAAGA TCGTAAACGC TATCGCGAAT TATTGGCGAT TGTCAAGGAA GAGTACGCTG ATATTGTTAA GAATGAAGTG CAACGCGCTA TTTCGGCTGA TGAAGAAGCT ATCAAGCGTT TGTGCGCCAA TTATATCGAC AATATCAAAG CCTATACCCA ACGCGAAAAA GTGCGGAATA AATTCACTGG AGCCTATGAG GAACCAGATG AGCGGCTGAT GCGCTCGATC GAAGAAAAGA TCGATATTCC TGATAATCGT AAAGATGATT TCCGGCGCGA AATTATGAAT TACATCGGAG CATTAGCAAT CGAAGGCAAA ACCTTTGATT ATCGCACGAA TGAACGACTC CATCGGGCCT TAGAATTAAA ACTCTTTGAA GATCAAAAAG ACAGCATCAA ACTAACTAGT TTAGTTTCAA GTGTTGTCGA TAAAGATACT CAAGAAAAAA TCGATGTGGT CAAAACCCGC TTAATTCGCG ATTTTGGCTA TAACGATCAA AGTGCTACCG ATGTGCTGAA TTATGTCGCG AGTATTTTCG CTCGTGGCGA TGCGACTCAG CGCAAGTAG
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Protein sequence | MTTPSGSQLM SLLSTLQDQQ NYQNLNWAGS FQDYLDIVAN NPKVTRNAFQ RIYDMIMSYG LEEFIDAKKK LIRYNFFTTN EFDEQDAIFG LEIPLMRLVN FFKAAAHGYG TEKRVLLLHG PVGSAKSTIA RRLKRGLERY SRSEEGALYT FDWFLGDIED LDAGKVKDAD WDPCPMHEDP LHLIPMEMRE AFLNEFNANL EPDDHITITG DLDPSCRYNF RDLMRRYNGD FAKVLRHVRV RRFVFSEQDR VGIGTFQPKD EKNQDSTELT GDINYRKIAI YGSDSDPRAF SFDGEFNIAN RGIIEFVEML KLDTAFLYDL LGASQEHRIK SKKFAQTHID EVIVGHTNEP EFRKLENNEF MEALKDRTVR IDIPYITRLR DEIRIYEKDF NSENVRVHIA PHTIEVAAMW AILTRLEEPK RANLTLLQKM KLYNGKSLPG FTEDNIKELR KESRREGMEG ISPRYIQDKI SNALVNYQSD GGINPFMVMN ELESGLKTHS LITNEEDRKR YRELLAIVKE EYADIVKNEV QRAISADEEA IKRLCANYID NIKAYTQREK VRNKFTGAYE EPDERLMRSI EEKIDIPDNR KDDFRREIMN YIGALAIEGK TFDYRTNERL HRALELKLFE DQKDSIKLTS LVSSVVDKDT QEKIDVVKTR LIRDFGYNDQ SATDVLNYVA SIFARGDATQ RK
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