| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4154 |
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| Symbol | |
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| ID | 5736015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5301731 |
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| End bp | 5302720 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641281308 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001546914 |
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| Protein GI | 159900667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00377851 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGC ATGCATTGAT CAAACGTTTA TTGATTTTGG TAACTCTGTT GAGTTTGGTA
GCTTGTGGCT CAAGCCAAAC CAACCAAACG GTAACTGCCG ATAAACCCAC TAAAACCTAT
GCCGATTTGG TGATTGGCTA TTCGCAAATC GGCGCTGAAA GCCGCTGGCG CACCGCTAAT
ACCCTCTCAA TCCAAGAAAG TGCCCAAGAT TTGGGCGTTG ACTTACGTTT TGCTGATGCC
CAACAGGAAC AAATTAACCA AATTAATGCG ATTCGTTCGT TCATCACTCA AAAAGTTGAT
CTGATTGGGG TTTCGCCAAT TGTTGCCGAT GGCTGGGATG AGGTGTTTGC TGAAGCCAAA
GCCGCTGGAA TTCCAATTAT TGTGGTTGAT CGCACGGCCA ATGTGCCCGA CGAATTAATT
ACCGCATTTA TTGGCTCGGA TTTTGTATTA GAAGGTGAAC GCGCTTGCGA AGAAATGGCT
CAGTTGCTCA ATCAAAAAGG CACGATTATT GAGCTAGAAG GCACGGTTGG CTCGGCTCCC
GCCCGCGATC GTAAAACTGG CTTTCATAAT TGCTTGAAAA AATATCCCGA AATGCAGGTT
TTGGTCTCAA AAAGCGGTGA TTTTACCCGT GCTCAAGGCA AAACTGTGTT GCAAGGCTTG
ATCAAGCAAT ATGGCACTGA TTTTGATGCG ATTTATGCTC ACAACGATGA TATGGCCTTG
GGTGCGATCG AATTGCTCAA AGAATTAGGC ATCAAACCAG GGGTCGAGGT CAAAATTGTC
TCGATCGATG CCGTTGAAGA TGCCTTCAAA GCCATGATTG CTGGCGATTT GAATGTAACG
GTTGAATGTA ACCCGTTGCT TGGGCCACAA TTTTTTGAAA CTGCCCTGAA AATCGTCAAC
GGCGAGCCAT TTGAACGCTG GGTTAAATCG AACGAAGGAA TTTTTCGCCA AGCAACTGCC
GCCCAAGATC TGCCTAAACG GCGCTATTAG
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| Protein sequence | MSQHALIKRL LILVTLLSLV ACGSSQTNQT VTADKPTKTY ADLVIGYSQI GAESRWRTAN
TLSIQESAQD LGVDLRFADA QQEQINQINA IRSFITQKVD LIGVSPIVAD GWDEVFAEAK
AAGIPIIVVD RTANVPDELI TAFIGSDFVL EGERACEEMA QLLNQKGTII ELEGTVGSAP
ARDRKTGFHN CLKKYPEMQV LVSKSGDFTR AQGKTVLQGL IKQYGTDFDA IYAHNDDMAL
GAIELLKELG IKPGVEVKIV SIDAVEDAFK AMIAGDLNVT VECNPLLGPQ FFETALKIVN
GEPFERWVKS NEGIFRQATA AQDLPKRRY
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